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NECEvent2014_3_5_scaffold_41

Alias: 173_003_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_41_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(394..1446)
DNA (1053bp) protein (351aa)
M42 glutamyl aminopeptidase family protein n=3 Tax=Clostridium difficile RepID=T4AU41_CLODI rbh
glutamyl-aminopeptidase
M42 glutamyl aminopeptidase family protein {ECO:0000313|EMBL:EQH98958.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_3_5_scaffold_41_2
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1539..3101)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BKU2_TREDN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMB25662.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
ABC transporter ATP-binding protein rbh
NECEvent2014_3_5_scaffold_41_3

Not on your lists

comp(3098..3958)
DNA (861bp) protein (287aa)
Arsenical resistance operon repressor n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E327_9FIRM
Marine sediment metagenome DNA, contig: S01H4_C01134 {ECO:0000313|EMBL:GAG62963.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
arsR; ArsR family transcriptional regulator
NECEvent2014_3_5_scaffold_41_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4296..5345)
DNA (1050bp) protein (350aa)
CAAX amino terminal protease family protein n=2 Tax=Clostridium botulinum A RepID=A5HZB5_CLOBH
CAAX amino terminal protease
Putative protease {ECO:0000313|EMBL:CAL82124.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC
NECEvent2014_3_5_scaffold_41_5
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5500..6894)
DNA (1395bp) protein (465aa)
Bacterial cell division membrane protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A5U3_DESDJ rbh
cell division membrane protein
Bacterial cell division membrane protein {ECO:0000313|EMBL:AFL99327.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitoba
NECEvent2014_3_5_scaffold_41_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6839..7186)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZJE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ14143.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
transcriptional regulator
NECEvent2014_3_5_scaffold_41_7
unknown

Not on your lists

comp(7374..7544)
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_41_8
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7653..8525)
DNA (873bp) protein (291aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6M6_DESDJ rbh
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFL99610.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacteriu
NECEvent2014_3_5_scaffold_41_9
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8621..9208)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQD2_FILAD
membrane protein
Membrane protein {ECO:0000313|EMBL:EFE28985.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896
NECEvent2014_3_5_scaffold_41_10
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9404..9589)
DNA (186bp) protein (62aa)
Small acid-soluble spore protein, alpha/beta type n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQU0_ALKMQ
alpha/beta type small acid-soluble spore protein
Small acid-soluble spore protein, alpha/beta type {ECO:0000313|EMBL:ABR48558.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliph
NECEvent2014_3_5_scaffold_41_11
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9759..10481
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VR94_CLOSH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC69302.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium su
NECEvent2014_3_5_scaffold_41_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10621..10890)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98369.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_41_13
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11245..12921)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXW0_CLOA9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS78029.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_3_5_scaffold_41_14
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13090..13518)
DNA (429bp) protein (143aa)
Universal stress protein n=2 Tax=unclassified Eubacteriaceae RepID=G9X2W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL18988.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
universal stress protein UspA
NECEvent2014_3_5_scaffold_41_15
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13650..15995)
DNA (2346bp) protein (782aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR32_CLOSD rbh
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20255.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
NECEvent2014_3_5_scaffold_41_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16148..16531)
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJQ6_ALKOO
Lactoylglutathione lyase {ECO:0000313|EMBL:KJF25793.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_3_5_scaffold_41_17
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16672..16914
DNA (243bp) protein (81aa)
Hemerythrin HHE cation binding protein n=2 Tax=Clostridium botulinum B RepID=B2TLF1_CLOBB
hemerythrin HHE cation binding protein
Uncharacterized protein {ECO:0000313|EMBL:ERI95429.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_3_5_scaffold_41_18
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16944..17513)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG76285.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT
hypothetical protein
NECEvent2014_3_5_scaffold_41_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17636..18718
DNA (1083bp) protein (361aa)
selU; tRNA 2-selenouridine synthase SelU (EC:2.9.1.-)
Putative ATP /GTP binding protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z297_9CLOT rbh
Putative ATP /GTP binding protein {ECO:0000313|EMBL:CCQ96990.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Es
NECEvent2014_3_5_scaffold_41_20
unknown

Not on your lists

comp(18763..19119)
DNA (357bp) protein (119aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_41_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19273..20037)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036F928D
TIGR02206 family protein {ECO:0000313|EMBL:CDA09977.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
hypothetical protein
NECEvent2014_3_5_scaffold_41_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20047..21039)
DNA (993bp) protein (331aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA ligase TrpS (EC:6.1.1.2) rbh
Tryptophan--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZA10_9CLOT rbh
NECEvent2014_3_5_scaffold_41_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21603..22145)
DNA (543bp) protein (181aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z9J6_9CLOT
NECEvent2014_3_5_scaffold_41_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22150..23067)
DNA (918bp) protein (306aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
cysK-1; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1YVB6_9CLOT rbh
NECEvent2014_3_5_scaffold_41_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23609..24310
DNA (702bp) protein (234aa)
Transcriptional regulatory protein YycF n=1 Tax=Clostridium ultunense Esp RepID=M1Z3W3_9CLOT
Transcriptional regulatory protein YycF {ECO:0000313|EMBL:CCQ92721.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune
two-component system signal transduction response regulator
NECEvent2014_3_5_scaffold_41_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24473..24850)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z5C2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92723.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_41_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25027..26400
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1YQC0_9CLOT rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_5_scaffold_41_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26397..27512)
DNA (1116bp) protein (372aa)
Putative Spore germination protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z4Q4_9CLOT
Putative Spore germination protein {ECO:0000313|EMBL:CCQ92719.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense E
spore germination protein
NECEvent2014_3_5_scaffold_41_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27518..28768)
DNA (1251bp) protein (417aa)
Putative Germination protein, Ger(X)C family n=1 Tax=Clostridium ultunense Esp RepID=M1Z5B7_9CLOT rbh
Putative Germination protein, Ger(X)C family {ECO:0000313|EMBL:CCQ92718.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u
germination protein, Ger(x)C family
NECEvent2014_3_5_scaffold_41_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28755..30197)
DNA (1443bp) protein (481aa)
GerA spore germination protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZG59_9CLOT rbh
GerA spore germination protein {ECO:0000313|EMBL:CCQ92717.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
GerA spore germination protein
Displaying items 1-30 of 129 in total

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