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NECEvent2014_3_5_scaffold_104

Alias: 173_003_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_104_1
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(193..1131)
DNA (939bp) protein (313aa)
carbamate kinase (EC:2.7.2.2)
UPI0003D61205 related cluster n=1 Tax=unknown RepID=UPI0003D61205 rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
NECEvent2014_3_5_scaffold_104_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..2619)
DNA (1254bp) protein (418aa)
Proton/glutamate symporter family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDF8_9CLOT rbh
Proton/glutamate symporter family protein {ECO:0000313|EMBL:CCQ95948.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultu
proton/glutamate symporter family protein
NECEvent2014_3_5_scaffold_104_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2751..4181)
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium ultunense Esp RepID=M1ZKS2_9CLOT rbh
NECEvent2014_3_5_scaffold_104_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4171..5634)
DNA (1464bp) protein (488aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=128897
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium ultunense Esp RepID=M1ZBT4_9CLOT rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
NECEvent2014_3_5_scaffold_104_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5649..5936)
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AT38_9CLOT
NECEvent2014_3_5_scaffold_104_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6042..8024)
DNA (1983bp) protein (661aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1288971 species="Bacteri
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCR3_9CLOT rbh
NECEvent2014_3_5_scaffold_104_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8029..10299)
DNA (2271bp) protein (757aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDF4_9CLOT rbh
NECEvent2014_3_5_scaffold_104_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10478..11125)
DNA (648bp) protein (216aa)
Integrase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QYI9_9CLOT rbh
Integrase {ECO:0000313|EMBL:EPR08365.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
integrase catalytic subunit
NECEvent2014_3_5_scaffold_104_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11167..11574)
DNA (408bp) protein (136aa)
Transposase IS3/IS911 family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZ87_CLOSW
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADL04338.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strai
NECEvent2014_3_5_scaffold_104_10
unknown

Not on your lists

comp(11623..11757)
DNA (135bp) protein (45aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_104_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12032..13027
DNA (996bp) protein (332aa)
AIR synthase related protein domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCR8_9CLOT rbh
AIR synthase related protein domain protein {ECO:0000313|EMBL:CCQ95949.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ul
hypE; hydrogenase maturation factor HypE rbh
NECEvent2014_3_5_scaffold_104_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13140..15221
DNA (2082bp) protein (694aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) rbh
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YZD6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ95950.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_5_scaffold_104_13
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15273..15794
DNA (522bp) protein (174aa)
UPF0316 protein Clos_0555 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=Y555_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:AKB77720.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina h
hypothetical protein
NECEvent2014_3_5_scaffold_104_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15861..16853
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDG2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ95953.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
gerM; spore germination protein GerM
NECEvent2014_3_5_scaffold_104_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17020..17631
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSX1_9CLOT
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
NECEvent2014_3_5_scaffold_104_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17633..18112
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Phosphodiesterase family protein n=1 Tax=Clostridium ultunense Esp RepID=M1YZE0_9CLOT
yfcE1; phosphodiesterase
NECEvent2014_3_5_scaffold_104_trna_1
unknown

Not on your lists

18203..18273
DNA (71bp)
transferRNA
NECEvent2014_3_5_scaffold_104_trna_2
unknown

Not on your lists

18286..18359
DNA (74bp)
transferRNA
NECEvent2014_3_5_scaffold_104_trna_3
unknown

Not on your lists

18383..18456
DNA (74bp)
transferRNA
NECEvent2014_3_5_scaffold_104_trna_4
unknown

Not on your lists

18645..18717
DNA (73bp)
transferRNA
NECEvent2014_3_5_scaffold_104_trna_5
unknown

Not on your lists

18744..18824
DNA (81bp)
transferRNA
NECEvent2014_3_5_scaffold_104_trna_6
unknown

Not on your lists

18877..18949
DNA (73bp)
transferRNA
NECEvent2014_3_5_scaffold_104_17
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19187..19726
DNA (540bp) protein (180aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=29354 species="Ba
dCTP deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=2 Tax=Clostridium thermocellum RepID=DCD_CLOTH
NECEvent2014_3_5_scaffold_104_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19997..20422
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20242.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_3_5_scaffold_104_19
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20464..20694
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SV06_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52981.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_3_5_scaffold_104_20
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20687..20854
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SV06_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52981.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_3_5_scaffold_104_21
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

21054..22706
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D3CB45 rbh
II-like Na/Pi co-transporter Tax=RBG_13_WOR_2_41_10_curated
Na/Pi-cotransporter II-like protein
NECEvent2014_3_5_scaffold_104_22
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22756..24114)
DNA (1359bp) protein (453aa)
Nucleoside recognition domain protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZL4_9CLOT rbh
Nucleoside recognition domain protein {ECO:0000313|EMBL:CDD55867.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sourc
nucleoside recognition domain-containing protein
NECEvent2014_3_5_scaffold_104_23
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24141..25043)
DNA (903bp) protein (301aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Al
Arginase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKX3_ALKOO
arginase
NECEvent2014_3_5_scaffold_104_24
Planococcus sp. PAMC 21323, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25094..26110)
DNA (1017bp) protein (339aa)
Dehydrogenase n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X5Q5_9BACL
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AIY06657.1}; TaxID=1526927 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus sp. PAMC 21323.;"
Displaying items 1-30 of 94 in total

View Taxonomy