ggKbase home page

NECEvent2014_3_5_scaffold_173

Alias: 173_003_scaffold_173

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_173_31
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27606..28892)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MSP2_9THEO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM77819.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
NECEvent2014_3_5_scaffold_173_32
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29110..30477
DNA (1368bp) protein (456aa)
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4B7_DESDJ rbh
transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AFL98801.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
NECEvent2014_3_5_scaffold_173_33
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30743..31624)
DNA (882bp) protein (294aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
thrB; homoserine kinase ThrB (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZL77_9CLOT rbh
NECEvent2014_3_5_scaffold_173_34
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31617..33101)
DNA (1485bp) protein (495aa)
Threonine synthase {ECO:0000313|EMBL:CCQ96721.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CCQ96721.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDS3_9CLOT rbh
NECEvent2014_3_5_scaffold_173_35
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33115..34329)
DNA (1215bp) protein (405aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphil
Homoserine dehydrogenase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIU0_ALKOO rbh
NECEvent2014_3_5_scaffold_173_36
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34330..35667)
DNA (1338bp) protein (446aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF50_9CLOT rbh
NECEvent2014_3_5_scaffold_173_37
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36151..37902)
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003733C23 rbh
Peptidase, M56 family protein {ECO:0000313|EMBL:EMS72185.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termiti
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
NECEvent2014_3_5_scaffold_173_38
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37913..38272)
DNA (360bp) protein (120aa)
Transcriptional repressor, CopY family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWI7_SYNGF
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ADY55753.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulu
NECEvent2014_3_5_scaffold_173_39
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38474..39328)
DNA (855bp) protein (285aa)
Catechol-2,3-dioxygenase {ECO:0000313|EMBL:CCQ93809.1}; EC=1.13.11.2 {ECO:0000313|EMBL:CCQ93809.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Catechol-2,3-dioxygenase n=1 Tax=Clostridium ultunense Esp RepID=M1Z7V3_9CLOT rbh
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_3_5_scaffold_173_40
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39379..40059)
DNA (681bp) protein (227aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXU3_CLOTA rbh
CAAX amino terminal protease family protein rbh
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDI49523.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium te
NECEvent2014_3_5_scaffold_173_41
unknown

Not on your lists

comp(40322..40564)
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_173_42
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

40996..41709
DNA (714bp) protein (238aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KGM5_9FIRM rbh
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67418.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
NECEvent2014_3_5_scaffold_173_43
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

41702..43264
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
ATP-binding region ATPase domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DVE4_DESRL rbh
ATP-binding protein
NECEvent2014_3_5_scaffold_173_44
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43579..44406)
DNA (828bp) protein (276aa)
transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F657
Transcription activator effector binding protein {ECO:0000313|EMBL:KAJ48931.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
transcription activator effector binding protein
NECEvent2014_3_5_scaffold_173_45
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44609..45502)
DNA (894bp) protein (298aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0C0_CLOCD
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV66927.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source
NECEvent2014_3_5_scaffold_173_46
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45606..45851
DNA (246bp) protein (82aa)
Helix-turn-helix protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0B9_CLOCD
Helix-turn-helix protein
Helix-turn-helix protein {ECO:0000313|EMBL:AEV66926.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (st
NECEvent2014_3_5_scaffold_173_47
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46531..47265)
DNA (735bp) protein (245aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLN9_CLOPH
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABX42783.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain
NECEvent2014_3_5_scaffold_173_48
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47764..48606)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQ47_9CLOT rbh
Beta-lactamase class A {ECO:0000313|EMBL:EXG83529.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
beta-lactamase
Displaying items 31-48 of 48 in total

View Taxonomy