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NECEvent2014_3_5_scaffold_173

Alias: 173_003_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_173_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
Aminotransferase class V n=1 Tax=Clostridium ultunense Esp RepID=M1ZGM7_9CLOT
Aminotransferase class V {ECO:0000313|EMBL:CCQ97413.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
NECEvent2014_3_5_scaffold_173_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..575)
DNA (348bp) protein (116aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGN2_9CLOT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CCQ97418.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune
mannose-6-phosphate isomerase
NECEvent2014_3_5_scaffold_173_3
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(596..1285)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKY1_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM06633.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
NECEvent2014_3_5_scaffold_173_4
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1285..1644)
DNA (360bp) protein (120aa)
Murein hydrolase transporter LrgA n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I6J2_9CLOT
Murein hydrolase transporter LrgA {ECO:0000313|EMBL:ETA80916.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis
LrgA family protein
NECEvent2014_3_5_scaffold_173_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1931..2542)
DNA (612bp) protein (204aa)
Flavoprotein WrbA n=1 Tax=Clostridium ultunense Esp RepID=M1ZGT7_9CLOT rbh
Flavoprotein WrbA {ECO:0000313|EMBL:CCQ97498.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NAD(P)H:quinone oxidoreductase, type IV
NECEvent2014_3_5_scaffold_173_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2638..2946)
DNA (309bp) protein (103aa)
Putative membrane protein n=1 Tax=Clostridium ultunense Esp RepID=M1YVH3_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCQ94565.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
branched-chain amino acid transport
NECEvent2014_3_5_scaffold_173_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2948..3748)
DNA (801bp) protein (267aa)
Putative branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Clostridium ultunense Esp RepID=M1Z8Z8_9CLOT rbh
Putative branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CCQ94566.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
hypothetical protein
NECEvent2014_3_5_scaffold_173_8
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3840..4595)
DNA (756bp) protein (252aa)
CoA-substrate-specific enzyme activase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1L4_9CLOT rbh
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:AKA71755.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologen
NECEvent2014_3_5_scaffold_173_9
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4611..5774)
DNA (1164bp) protein (388aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIQ3_ALKOO rbh
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ABW19685.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus
NECEvent2014_3_5_scaffold_173_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5910..6287)
DNA (378bp) protein (126aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5U0_CLOSW
nitrogen-fixing NifU domain-containing protein
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:ADL05273.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain
NECEvent2014_3_5_scaffold_173_11
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6363..8225)
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PRE2_9CLOT rbh
NECEvent2014_3_5_scaffold_173_12
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8405..9445)
DNA (1041bp) protein (347aa)
Copper amine oxidase domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B524_CLOA9
copper amine oxidase domain-containing protein
Copper amine oxidase domain-containing protein {ECO:0000313|EMBL:AFS79661.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (str
NECEvent2014_3_5_scaffold_173_13
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9535..10836)
DNA (1302bp) protein (434aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFH8_9CLOT
Chemotaxis protein {ECO:0000313|EMBL:KGK87387.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
methyl-accepting chemotaxis protein
NECEvent2014_3_5_scaffold_173_14
unknown

Not on your lists

comp(10877..11005)
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_173_15
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11448..12641
DNA (1194bp) protein (398aa)
Saccharopine dehydrogenase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YDW0_ANEAE rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:ERI08976.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurin
saccharopine dehydrogenase-like oxidoreductase
NECEvent2014_3_5_scaffold_173_16
unknown

Not on your lists

12589..12927
DNA (339bp) protein (113aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_173_17
Bacillus sp. X1(2014), Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12807..13649)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHQ5_9CLOT rbh
uridine phosphorylase rbh
Uridine phosphorylase {ECO:0000313|EMBL:AIM15187.1}; TaxID=1565991 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. X1(2014).;"
NECEvent2014_3_5_scaffold_173_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13695..14270)
DNA (576bp) protein (192aa)
Class II aldolase/adducin-like protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG81_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69333.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
NECEvent2014_3_5_scaffold_173_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14350..15069)
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=742733 species="Bacteria
deoD2; purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ86_9CLOT rbh
NECEvent2014_3_5_scaffold_173_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15090..16145)
DNA (1056bp) protein (352aa)
Methylthioribose-1-phosphate isomerase {ECO:0000313|EMBL:KJJ69747.1}; EC=5.3.1.23 {ECO:0000313|EMBL:KJJ69747.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
S-methyl-5-thioribose-1-phosphate isomerase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ87_9CLOT rbh
S-methyl-5-thioribose-1-phosphate isomerase
NECEvent2014_3_5_scaffold_173_21
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16165..17085)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ82_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE96501.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
inner-membrane translocator
NECEvent2014_3_5_scaffold_173_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17110..18228)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGV7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98066.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
inner-membrane translocator
NECEvent2014_3_5_scaffold_173_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18225..19745)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ84_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE96503.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC transporter-like protein
NECEvent2014_3_5_scaffold_173_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19780..20886)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZI46_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98068.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
basic membrane lipoprotein
NECEvent2014_3_5_scaffold_173_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21168..21893
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98072.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
GntR family transcriptional regulator
NECEvent2014_3_5_scaffold_173_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22042..22527)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92952.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_173_27
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22667..23338
DNA (672bp) protein (224aa)
rluC2; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.23)
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:AFS79540.1}; EC=5.4.99.23 {ECO:0000313|EMBL:AFS79540.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Got
Ribosomal large subunit pseudouridine synthase C n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3S3_CLOA9
NECEvent2014_3_5_scaffold_173_28
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23402..24871)
DNA (1470bp) protein (490aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ELS5_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE34365.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942
methyl-accepting chemotaxis sensory transducer rbh
NECEvent2014_3_5_scaffold_173_29
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24960..27128)
DNA (2169bp) protein (723aa)
NADH:flavin oxidoreductase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KU29_METHD rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGB48626.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanom
NECEvent2014_3_5_scaffold_173_30
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27151..27594)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MSP1_9THEO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM77818.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
Displaying items 1-30 of 48 in total

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