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NECEvent2014_3_5_scaffold_173_27

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 5
Location: 22667..23338

Top 3 Functional Annotations

Value Algorithm Source
rluC2; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.23) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 232.0
  • Bit_score: 297
  • Evalue 4.10e-78
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:AFS79540.1}; EC=5.4.99.23 {ECO:0000313|EMBL:AFS79540.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Got similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 232.0
  • Bit_score: 297
  • Evalue 2.10e-77
Ribosomal large subunit pseudouridine synthase C n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3S3_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 232.0
  • Bit_score: 297
  • Evalue 1.50e-77

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGATATTAAAATTATTTTTGAAGATAAAGATATATTAGTAGTGGAAAAGCCACCTAAGATTCCCTGTCAATCTGATAAAACTTCTGACGATGACATAATGAGCATATTAAATAGACCCTATCTTGGTCTTGTACACAGATTAGATAGACCTGTAGGAGGAGTTATGGTATATGCCAAAAATGAAAAAACCAATTCTTTTCTTTCTAAAGAAGTTTCAGCAAGAAGATTATATAAGGAATATCTTGTAGTGGTGTGCGGTAGACCTGAAGCTTCGAAGGGAGAACTAAGAGATTATTTAAAAAAACTTCGAACTATAAATATGAGTAAGGTAGTTGATAAGGGTACTAATGGTGCTAAGGAAGCTGTATTAGAATATGAATTATTAGAGTCTAAGGATACAGAGGAATATGGAACATTAAGCCTGCTTAAGGTTATCTTAAAAACTGGCCGTCACCATCAAATAAGGGTTCAACTCTCCAATGCTGGCTTTCCTATATGGGGAGATAATAAATATAATAAAACCTTTGTAAAGAAAAAAGAATGGACTCAAATTTCACTATGGTCTTATAAAATAGGATTTTATCACTTTACTAATAAGACAAATTCTACTTTTATTTCTCTCCCTTATGATGAATATCCTTGGGATGTTTTTGATATGAAAGACAATTAA
PROTEIN sequence
Length: 224
MDIKIIFEDKDILVVEKPPKIPCQSDKTSDDDIMSILNRPYLGLVHRLDRPVGGVMVYAKNEKTNSFLSKEVSARRLYKEYLVVVCGRPEASKGELRDYLKKLRTINMSKVVDKGTNGAKEAVLEYELLESKDTEEYGTLSLLKVILKTGRHHQIRVQLSNAGFPIWGDNKYNKTFVKKKEWTQISLWSYKIGFYHFTNKTNSTFISLPYDEYPWDVFDMKDN*