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NECEvent2014_3_5_scaffold_340

Alias: 173_003_scaffold_340

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_340_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

643..1866
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrS; Tyrosine-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF69_9CLOT rbh
NECEvent2014_3_5_scaffold_340_2
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1933..2934)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNI7_ALKMQ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABR47755.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
NECEvent2014_3_5_scaffold_340_3
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3120..3857)
DNA (738bp) protein (246aa)
Uridine phosphorylase Udp {ECO:0000313|EMBL:KDR94992.1}; EC=2.4.2.3 {ECO:0000313|EMBL:KDR94992.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
Purine or other phosphorylase family 1 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJC5_ALKOO
purine phosphorylase family 1
NECEvent2014_3_5_scaffold_340_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3854..5197)
DNA (1344bp) protein (448aa)
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV30_CLOSD rbh
putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CBH20510.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
NECEvent2014_3_5_scaffold_340_5
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5187..6122)
DNA (936bp) protein (312aa)
Inner-membrane translocator n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJC7_ALKOO rbh
Inner-membrane translocator {ECO:0000313|EMBL:KDR94991.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] lito
inner-membrane translocator
NECEvent2014_3_5_scaffold_340_6
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6115..7197)
DNA (1083bp) protein (361aa)
YufP n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV27_CLOSD rbh
yufP; YufP
YufP {ECO:0000313|EMBL:CBH20507.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662
NECEvent2014_3_5_scaffold_340_7
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7199..8740)
DNA (1542bp) protein (514aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV26_CLOSD rbh
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KDR94989.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Cl
sugar ABC transporter, ATP-binding protein
NECEvent2014_3_5_scaffold_340_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8814..9836)
DNA (1023bp) protein (341aa)
Basic membrane lipoprotein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJD0_ALKOO rbh
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ABW19912.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus
NECEvent2014_3_5_scaffold_340_9
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9939..10625)
DNA (687bp) protein (229aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Thermoanaerobacterium RepID=D9TQH6_THETC
Crp/Fnr family transcriptional regulator
CarD family transcriptional regulator {ECO:0000313|EMBL:ETO37280.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis;
NECEvent2014_3_5_scaffold_340_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10815..11384)
DNA (570bp) protein (190aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CQK6_CLOSO
NECEvent2014_3_5_scaffold_340_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11511..11852
DNA (342bp) protein (114aa)
Acetyltransferase, ribosomal protein N-acetylase n=2 Tax=Paenibacillus polymyxa RepID=E3EIS6_PAEPS
Acetyltransferase family protein {ECO:0000313|EMBL:KIE46460.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense
acetyltransferase
NECEvent2014_3_5_scaffold_340_12
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11849..12052
DNA (204bp) protein (68aa)
acetyltransferase n=1 Tax=Paenibacillus peoriae RepID=UPI00026C6256
Aminoglycoside N6'-acetyltransferase {ECO:0000313|EMBL:GAE06805.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 1
acetyltransferase
NECEvent2014_3_5_scaffold_340_13
unknown

Not on your lists

12087..12362
DNA (276bp) protein (92aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_340_14
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12398..12925)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DG25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ74356.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
NECEvent2014_3_5_scaffold_340_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12948..14120)
DNA (1173bp) protein (391aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=2 Tax=Clostridium botulinum F RepID=A7GA05_CLOBL
malic enzyme
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:ABS41733.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_3_5_scaffold_340_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14245..14466)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI00028A35C5
Seryl-tRNA synthetase {ECO:0000313|EMBL:KJS19224.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
NECEvent2014_3_5_scaffold_340_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14674..15258
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99595.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
NECEvent2014_3_5_scaffold_340_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15304..15762)
DNA (459bp) protein (153aa)
Peroxiredoxin {ECO:0000256|HAMAP-Rule:MF_00401}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_00401};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostrid
Probable peroxiredoxin n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXM4_CLOCD
peroxiredoxin
NECEvent2014_3_5_scaffold_340_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15805..15948)
DNA (144bp) protein (48aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:ADL06377.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ADL06377.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium
Peroxiredoxin n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0E4_CLOSW
NECEvent2014_3_5_scaffold_340_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16050..16622)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM12_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18179.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_scaffold_340_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16838..18064)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFZ2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOD01230.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
putative Zn-dependent protease-like protein
NECEvent2014_3_5_scaffold_340_22
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18077..19414)
DNA (1338bp) protein (446aa)
Putative Zn-dependent protease-like protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JFR7_9CLOT rbh
putative Zn-dependent protease-like protein
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:AEY64431.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
NECEvent2014_3_5_scaffold_340_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19628..20296
DNA (669bp) protein (223aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=1288971 species="Bacteria; Firm
NAD(P)H-hydrate epimerase n=1 Tax=Clostridium ultunense Esp RepID=M1Z1A9_9CLOT rbh
YjeF family protein
NECEvent2014_3_5_scaffold_340_24
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20306..20836)
DNA (531bp) protein (177aa)
Amidase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2N4_9CLOT
Amidase {ECO:0000313|EMBL:ETA79546.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
Amidases related to nicotinamidase
NECEvent2014_3_5_scaffold_340_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20870..21121)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AMN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58100.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_3_5_scaffold_340_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21241..23346)
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFU5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ97616.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_340_27
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23379..23540)
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LTY8_HIPMA
flavin reductase domain-containing FMN-binding protein
Tax=BJP_IG2157_Clostridiales_35_16
NECEvent2014_3_5_scaffold_340_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23616..24038)
DNA (423bp) protein (141aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTU6_CLOB8
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABR33776.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (
NECEvent2014_3_5_scaffold_340_29
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(24088..24648)
DNA (561bp) protein (187aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PXI5_9FUSO
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EHO78171.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.
NECEvent2014_3_5_scaffold_340_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24686..25042)
DNA (357bp) protein (119aa)
Arsenate reductase and related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM25_ALKOO
arsenate reductase-like protein
Arsenate reductase and related {ECO:0000313|EMBL:ABW18192.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (st
Displaying 30 items

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