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NECEvent2014_3_5_scaffold_400

Alias: 173_003_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_400_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..100
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDQ1_9FIRM
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridi
NECEvent2014_3_5_scaffold_400_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


446..763
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHW1_9CLOT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ribosomal protein S10
NECEvent2014_3_5_scaffold_400_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


819..1445
DNA (627bp) protein (209aa)
50S ribosomal protein L3 n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D2R5_9FIRM rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;"
rplC; 50S ribosomal protein L3
NECEvent2014_3_5_scaffold_400_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1473..2096
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6V5_9CLOT rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rplD; 50S ribosomal protein L4
NECEvent2014_3_5_scaffold_400_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2096..2389
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B177_CLOA9
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium
NECEvent2014_3_5_scaffold_400_6
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2415..3245
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PR87_9FIRM rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393
NECEvent2014_3_5_scaffold_400_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3272..3556
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHW3_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsS; 30S ribosomal protein S19
NECEvent2014_3_5_scaffold_400_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3577..3912
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7C5_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
50S ribosomal protein L22
NECEvent2014_3_5_scaffold_400_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3930..4598
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6W1_9CLOT rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsC; 30S ribosomal protein S3 rbh
NECEvent2014_3_5_scaffold_400_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4628..5071
DNA (444bp) protein (148aa)
50S ribosomal protein L16 n=1 Tax=Clostridium ultunense Esp RepID=M1YSE7_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplP; 50S ribosomal protein L16
NECEvent2014_3_5_scaffold_400_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5061..5267
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Clostridium ultunense Esp RepID=M1Z620_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
RpmC; 50S ribosomal protein L29
NECEvent2014_3_5_scaffold_400_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5274..5528
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX0_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpsQ; 30S ribosomal protein S17
NECEvent2014_3_5_scaffold_400_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5558..5926
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7D0_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
50S ribosomal protein L14
NECEvent2014_3_5_scaffold_400_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5942..6256
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6W8_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rplX; 50S ribosomal protein L24
NECEvent2014_3_5_scaffold_400_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6283..6825
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Clostridium ultunense Esp RepID=M1YSF4_9CLOT rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rplE; 50S ribosomal protein L5
NECEvent2014_3_5_scaffold_400_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7061..7456
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX4_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
30S ribosomal protein S8
NECEvent2014_3_5_scaffold_400_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7490..8029
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7D4_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
50S ribosomal protein L6
NECEvent2014_3_5_scaffold_400_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8046..8408
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2T9_CLOA9
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / D
NECEvent2014_3_5_scaffold_400_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8426..8932
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Clostridium ultunense Esp RepID=M1YSF6_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsE; 30S ribosomal protein S5
NECEvent2014_3_5_scaffold_400_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8946..9122
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZZ0_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
hypothetical protein
NECEvent2014_3_5_scaffold_400_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9141..9590
DNA (450bp) protein (150aa)
50S ribosomal protein L15 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHX7_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
50S ribosomal protein L15
NECEvent2014_3_5_scaffold_400_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9591..10865
DNA (1275bp) protein (425aa)
Protein translocase subunit SecY n=1 Tax=Clostridium ultunense Esp RepID=M1Z7E0_9CLOT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
secY; preprotein translocase subunit SecY
NECEvent2014_3_5_scaffold_400_23
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10885..11532
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase Adk (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQT0_9CLOT rbh
NECEvent2014_3_5_scaffold_400_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11603..11884
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YSG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93505.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_400_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11915..12133
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Clostridium ultunense Esp RepID=M1Z637_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
infA; translation initiation factor IF-1
NECEvent2014_3_5_scaffold_400_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12319..12681
DNA (363bp) protein (121aa)
30S ribosomal protein S13 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY1_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
30S ribosomal protein S13
NECEvent2014_3_5_scaffold_400_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12700..13098
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7E6_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsK; 30S ribosomal protein S11
NECEvent2014_3_5_scaffold_400_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13114..13737
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6Y8_9CLOT rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsD2; 30S ribosomal protein S4 rbh
NECEvent2014_3_5_scaffold_400_29
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13806..14753
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZL2_CLOA9 rbh
NECEvent2014_3_5_scaffold_400_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14777..15118
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY3_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplQ; 50S ribosomal protein L17
Displaying items 1-30 of 36 in total

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