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NECEvent2014_3_5_scaffold_402

Alias: 173_003_scaffold_402

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_402_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98..388
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00039.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
NECEvent2014_3_5_scaffold_402_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

405..776
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZI73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98259.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_402_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

787..1998
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIJ8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98258.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_402_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2011..2391
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZM34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98257.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_402_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2485..3939
DNA (1455bp) protein (485aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Clostridium ultunense Esp RepID=M1ZIJ5_9CLOT rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:CCQ98253.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
GntR family transcriptional regulator
NECEvent2014_3_5_scaffold_402_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4016..5506)
DNA (1491bp) protein (497aa)
Glycine betaine transporter n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EXD1_CLOSG rbh
Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:KIE45820.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
grdT1; glycine betaine transporter OpuD
NECEvent2014_3_5_scaffold_402_7
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5578..5817)
DNA (240bp) protein (80aa)
grdH; betaine reductase complex component B subunit beta (EC:1.21.4.4)
Betaine reductase complex component B subunit beta; EC=1.21.4.4;; Selenoprotein PB beta; TaxID=1731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eub
Betaine reductase complex component B subunit beta n=1 Tax=Eubacterium acidaminophilum RepID=GRDH_EUBAC
NECEvent2014_3_5_scaffold_402_8
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5845..6888)
DNA (1044bp) protein (348aa)
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein n=2 Tax=Clostridium carboxidivorans P7 RepID=D6MIE9_9CLOT rbh
selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:AKA69160.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
NECEvent2014_3_5_scaffold_402_9
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6900..8225)
DNA (1326bp) protein (442aa)
Betaine reductase complex component B subunit alpha {ECO:0000313|EMBL:EDP24377.1}; EC=1.21.4.4 {ECO:0000313|EMBL:EDP24377.1};; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
Betaine reductase complex component B subunit alpha n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLE7_9FIRM rbh
betaine reductase
NECEvent2014_3_5_scaffold_402_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8494..9159
DNA (666bp) protein (222aa)
Putative transcriptional regulator n=1 Tax=Clostridium ultunense Esp RepID=M1ZJI8_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:CCQ98733.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense E
grdR; putative transcriptional regulator
NECEvent2014_3_5_scaffold_402_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9661..12294
DNA (2634bp) protein (878aa)
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:KIE48436.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KIE48436.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
mgtA; magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KZ52_CLOBM rbh
NECEvent2014_3_5_scaffold_402_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12278..13093)
DNA (816bp) protein (272aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHB0_9CLOT rbh
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:CCQ98251.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense
arylesterase, non-heme chloride peroxidase
NECEvent2014_3_5_scaffold_402_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13155..14183)
DNA (1029bp) protein (343aa)
Putative Uncharacterized membrane protein YkvI n=1 Tax=Clostridium ultunense Esp RepID=M1ZII9_9CLOT rbh
Putative Uncharacterized membrane protein YkvI {ECO:0000313|EMBL:CCQ98243.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_3_5_scaffold_402_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..15231)
DNA (945bp) protein (315aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CCQ98734.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CCQ98734.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1ZJA8_9CLOT rbh
NECEvent2014_3_5_scaffold_402_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15310..16608)
DNA (1299bp) protein (433aa)
Putative D-beta-hydroxybutyrate permease n=1 Tax=Clostridium ultunense Esp RepID=M1Z7G9_9CLOT rbh
Putative D-beta-hydroxybutyrate permease {ECO:0000313|EMBL:CCQ98735.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultun
citrate CCS family transporter
NECEvent2014_3_5_scaffold_402_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16754..17644)
DNA (891bp) protein (297aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CCQ98736.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CCQ98736.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
3-hydroxybutyrate dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1ZIE8_9CLOT rbh
3-hydroxybutyrate dehydrogenase
NECEvent2014_3_5_scaffold_402_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17829..19535)
DNA (1707bp) protein (569aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Clostridium ultunense Esp RepID=M1ZMD0_9CLOT rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:CCQ98737.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
sigma-54 dependent transcription regulator
NECEvent2014_3_5_scaffold_402_18
unknown

Not on your lists

comp(19881..20066)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 18 items

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