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NECEvent2014_3_5_scaffold_402_17

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 5
Location: comp(17829..19535)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Clostridium ultunense Esp RepID=M1ZMD0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 568.0
  • Bit_score: 795
  • Evalue 3.30e-227
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:CCQ98737.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 568.0
  • Bit_score: 795
  • Evalue 4.70e-227
sigma-54 dependent transcription regulator similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 557.0
  • Bit_score: 564
  • Evalue 2.70e-158

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1707
ATGTCTAATAACGGGATAAATTTATATAATCTAGCTAATTCTTTAAATATAGGTATTTTAGTAGTAGATGAATATTGTAATATAAATTTTTTTAATAGTGAAGCTTTAAATATATTAGAATTATTTGATGAAAATAATCTAAACAGAAACCTATCTAATATCCTATCTAATTTTAAGATTAAATCTTTTTTAAAGTCTAATAAAAAACATGAATCCCAGAAACTAAAATATAATGGCAAAGATATTATTGTAATAAAAAAAGCAATTTCTAATAATGATACTAATGAAGGAGCCTATATAATTTTTCAAAAATTAGATACTTATAAAGAATTTATTAGACAGTTTGATGATGAGATAGAAGCATCTTCTCTATTAAATACAGTAATGGAAGCTACAAATGATGCTATTGTTTATGTTAATAAAGATGGATATATAGAAATGTTAAGTAATCCTTATGCGGAATTCTTAGGAGTAGATAGAGAAGTGGCAATAGGCAAACATGTACGAGAAGTTATAGAGAATACGAGAATGGATATTGTAATAAAGACAGGAATACCAGAAATTGCCCAAGTTCAAGAGATAAATGGTAAAAATATGATAGCTACTAGAATACCAGTATTTGTTAATGGTAATGTAGTAGGTGCTGTAGGTAAGGTATTATTTAAAGATGTAGATGAATTAAATTCCCTATATATGAAGATAAATAAGATTGAGAAAGAATTGAATCTATATAAGGATGAATTTAAAAAAGTAAACAAAGCAAATTATGCTTTAGATAGCATCATAAGTATAAGTAAGTCTATGGAAAGCCTGAAGGAACTTACAAAAAGGGCAGCAAAGACGAATTCAAATGTTCTAATTTTAGGAGAATCTGGCACTGGAAAAGAATTATTTGCACATGCAATTCATAATAACAGTAGACGTATAGATGCACCTTTTATTAGAGTAAATTGTGGGGCAATTCCATATGAGTTATTAGAATCAGAATTATTTGGATATGAAGAAGGTTCTTTTACAGGTGCTAAAAAAGGAGGAAAGATCGGGAAGTTTAAGGCTGCAGATGGAGGTACTATCTTTTTAGATGAAATTGGTGATTTACCTATGAATATGCAGGTAAAATTATTAAGAGTTCTCCAAGATAAAGAAATAGAGAGAATAGGTTGTAATTATTCAGAGAAAATTGATATTAGAGTTATAGCAGCAACTAATAAAGATCTAGAAAAAATGGTATCTGAAGATATGTTTAGATTAGATTTATATTATAGATTAAATGTAGTAAGTATAAAAATTCCTCCCTTAAGGGAAAGAAAAGAAGATATAACTATTCTGTCCAAGTATTTAGTAAACAAGATATCAAAAGGAGAAAATATAAAAGTAGATAAGATATCAGAGAGTACAATAGAATATTTAAAAAATTATGATTGGCCTGGAAATGTAAGGGAGCTAGAAAATATCCTAGAGAGGGCTATAAATTTCTTAGAAGAAGAAACAATAATTAAGCCAGAACATTTGCCTACTAAAATTACAGGTATGACTAGAAATAAGCAGATGAAAAGTTTAAAATCCATTTTAGAAGAGGTAGAAAAACAATCTATAATAGATAGCCTAATAATTGCTAATGGCAACAAGACTTTAGCTGCCAATACATTAGATATTAGCAGGACAAGTTTATATGAGAAGATTTCAAAATATGAAATAGATATGTAA
PROTEIN sequence
Length: 569
MSNNGINLYNLANSLNIGILVVDEYCNINFFNSEALNILELFDENNLNRNLSNILSNFKIKSFLKSNKKHESQKLKYNGKDIIVIKKAISNNDTNEGAYIIFQKLDTYKEFIRQFDDEIEASSLLNTVMEATNDAIVYVNKDGYIEMLSNPYAEFLGVDREVAIGKHVREVIENTRMDIVIKTGIPEIAQVQEINGKNMIATRIPVFVNGNVVGAVGKVLFKDVDELNSLYMKINKIEKELNLYKDEFKKVNKANYALDSIISISKSMESLKELTKRAAKTNSNVLILGESGTGKELFAHAIHNNSRRIDAPFIRVNCGAIPYELLESELFGYEEGSFTGAKKGGKIGKFKAADGGTIFLDEIGDLPMNMQVKLLRVLQDKEIERIGCNYSEKIDIRVIAATNKDLEKMVSEDMFRLDLYYRLNVVSIKIPPLRERKEDITILSKYLVNKISKGENIKVDKISESTIEYLKNYDWPGNVRELENILERAINFLEEETIIKPEHLPTKITGMTRNKQMKSLKSILEEVEKQSIIDSLIIANGNKTLAANTLDISRTSLYEKISKYEIDM*