ggKbase home page

NECEvent2014_3_5_scaffold_94_61

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 5
Location: 65024..66412

Top 3 Functional Annotations

Value Algorithm Source
Arginine utilization regulatory protein RocR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSP1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 464.0
  • Bit_score: 591
  • Evalue 7.80e-166
  • rbh
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:EOD01676.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisa similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 464.0
  • Bit_score: 591
  • Evalue 1.10e-165
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 467.0
  • Bit_score: 512
  • Evalue 1.70e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1389
ATGAAAGATTTATTCTTTAGAGAAAATGTATTGGAAATTCTAGATTATTTGGAAGAGGGACTACATATTATTGATAAAAATGGAATAATAGTTTATTATAATAAATTTGCTCAAGGAATAGATGGAATAGAGAGAGAGAAAGTTATAGGCAGACATTTACTTGAAGTATATCCATCTCTTACAGAAGAAACCAGTACCCTTCTCACAGTAATTCGTACAGGAGAATCAATGCATAAGAAGGAACAAACATTTCTTAACTATAAAGGTGAAAAAATTACAACAATAAATACATCAATACCAATAACATCAAAAGGTAAAATTTTAGGAGCATTGGAAATATCTAAGGATATAACGACAGTACGTCAAATGTCGGAGAAAATAGTAGACCTTCAAAATAAATTATATAATAATAAAAAAGAAAAGAATGCCATAGATAAAGCTAAAGAATCTGCTCAGTTTACCTTATTAGATATTGTAGGTGAAAACAAAGAGATGATAAGGTTGAAATCACTTGCACTAAAGGCGGCAGAATCAGACGCCTCTGTATTGATATCAGGAGATACTGGAACAGGAAAGGAATTATTTGTTCATTCTATTCACAATGCGAGCTCGAGGCGATATAAACCTTTTATCACACAGAATTGTGCGGCACTTCCAGGTAATCTTTTAGAGGGAATCCTTTTTGGTACTATAAAGGGAGGCTTTACTGGAGCGGAAGATAGACCTGGATTGTTTGAATTAGCCCATGGGGGTACATTATTTTTAGATGAAATTAACTCTATGCCTTTAGAACTTCAATCTAAGCTCCTTAGAGTTCTACAAGATGGTACCATAAGAAGAGTAGGTGCTACAAATACAATTAAAGTTAATGTTAGAATAATTGCTGCAACGAATATATCCCCAGAAGAAGCAGTGGAGAAAAGACAAATTAGGAGAGATTTGTACTATAGATTAAATGTAGTATCTTTTGAAATTCCGCCCCTTAAAGATAGAAAGGATGATATACCTGTACTTACAAATTATTTCATTAATAAATTTAACGAGAAGTTAGGTAAAAAAGTAAAAGGTATATCAAAGGGTGTACTAAATATATTCAATAATTATGAGTGGGATGGAAATGTAAGGGAGCTGGAGCATCTAATTGAAGGTATAATGAGTATATCTGATGGAGAAATCATAGATATGGGGGACCTTCCATATAAATTTAGACAGCATAAGAAAAATCATGAATTATACGAATCCTCTCTCTCAGAAATATTAGAAGAAACAGAAAGAAATTTAATAAAAGAAGCTCTAAAACAAACAGATCATAATATAACTAGAACAGCAGAACTACTAAAAATACCAAGACAAACACTACAGTATAGATTATCAAAGCTAGGGCTTTGA
PROTEIN sequence
Length: 463
MKDLFFRENVLEILDYLEEGLHIIDKNGIIVYYNKFAQGIDGIEREKVIGRHLLEVYPSLTEETSTLLTVIRTGESMHKKEQTFLNYKGEKITTINTSIPITSKGKILGALEISKDITTVRQMSEKIVDLQNKLYNNKKEKNAIDKAKESAQFTLLDIVGENKEMIRLKSLALKAAESDASVLISGDTGTGKELFVHSIHNASSRRYKPFITQNCAALPGNLLEGILFGTIKGGFTGAEDRPGLFELAHGGTLFLDEINSMPLELQSKLLRVLQDGTIRRVGATNTIKVNVRIIAATNISPEEAVEKRQIRRDLYYRLNVVSFEIPPLKDRKDDIPVLTNYFINKFNEKLGKKVKGISKGVLNIFNNYEWDGNVRELEHLIEGIMSISDGEIIDMGDLPYKFRQHKKNHELYESSLSEILEETERNLIKEALKQTDHNITRTAELLKIPRQTLQYRLSKLGL*