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NECEvent2014_3_5_scaffold_94

Alias: 173_003_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_94_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

221..1627
DNA (1407bp) protein (469aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJJ5_ALKOO rbh
PAS modulated sigma54 specific transcriptional regulator
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABW19977.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.
NECEvent2014_3_5_scaffold_94_2
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1854..3026
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJJ4_ALKOO rbh
acetyl-CoA acetyltransferase rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABW19976.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra
NECEvent2014_3_5_scaffold_94_3
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3048..3869
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJJ3_ALKOO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABW19975.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_scaffold_94_4
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

3892..4665
DNA (774bp) protein (258aa)
Putative cyclase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPN0_FUSVA rbh
Putative cyclase {ECO:0000313|EMBL:EES63241.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
cyclase family protein
NECEvent2014_3_5_scaffold_94_5
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

4727..6694
DNA (1968bp) protein (656aa)
Transporter, SSS family n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPM8_FUSVA rbh
Transporter, SSS family {ECO:0000313|EMBL:EES63239.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Na+/solute symporter rbh
NECEvent2014_3_5_scaffold_94_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7019..8443
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z3R4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ97535.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
AMMECR1 domain-containing protein
NECEvent2014_3_5_scaffold_94_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8576..9553
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFM5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ97536.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Radical SAM domain-containing protein
NECEvent2014_3_5_scaffold_94_8
unknown

Not on your lists

9651..9842
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_94_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9937..11352
DNA (1416bp) protein (472aa)
speA1; arginine decarboxylase SpeA (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase major region n=1 Tax=Clostridium ultunense Esp RepID=M1ZGW6_9CLOT rbh
Orn/Lys/Arg decarboxylase major region {ECO:0000313|EMBL:CCQ97538.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
NECEvent2014_3_5_scaffold_94_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11369..12001
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1288971 species="Bacteria; Firmicutes; Clostri
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZGH8_9CLOT
NECEvent2014_3_5_scaffold_94_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12006..12332
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z3R9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97540.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_94_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12345..12629
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97541.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_94_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12645..13613
DNA (969bp) protein (323aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7) rbh
DNA polymerase III delta prime subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWR4_9CLOT rbh
DNA polymerase III delta prime subunit {ECO:0000313|EMBL:KGG80886.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaeroba
NECEvent2014_3_5_scaffold_94_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13629..14528
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z688_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ93239.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
PSP1 domain-containing protein rbh
NECEvent2014_3_5_scaffold_94_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14618..14794
DNA (177bp) protein (59aa)
Ferredoxin n=1 Tax=Clostridium ultunense Esp RepID=M1YRS9_9CLOT
Ferredoxin {ECO:0000313|EMBL:CCQ93240.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit
NECEvent2014_3_5_scaffold_94_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14899..15630
DNA (732bp) protein (244aa)
Methyltransferase small n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG80884.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
methyltransferase small
NECEvent2014_3_5_scaffold_94_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15685..16521
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium ultunense Esp RepID=M1Z5F1_9CLOT rbh
NECEvent2014_3_5_scaffold_94_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16624..17619
DNA (996bp) protein (332aa)
NurA domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z6P1_9CLOT rbh
NurA domain protein {ECO:0000313|EMBL:CCQ93243.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NurA domain protein
NECEvent2014_3_5_scaffold_94_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..19637
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z691_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ93244.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_94_20
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19971..22571
DNA (2601bp) protein (867aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR30_CLOSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20253.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
NECEvent2014_3_5_scaffold_94_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22620..23651)
DNA (1032bp) protein (344aa)
3D domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHB9_9CLOT rbh
3D domain protein {ECO:0000313|EMBL:CCQ93247.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
3D/G5 domain-containing protein
NECEvent2014_3_5_scaffold_94_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24005..24616
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99660.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
NECEvent2014_3_5_scaffold_94_23
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24842..26098
DNA (1257bp) protein (419aa)
Putative metal-dependent phosphohydrolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBG2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGG80096.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
metal dependent phosphohydrolase
NECEvent2014_3_5_scaffold_94_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26095..26682
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG80097.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
NECEvent2014_3_5_scaffold_94_25
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27191..28648
DNA (1458bp) protein (486aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM71_ALKMQ rbh
Anthranilate synthase {ECO:0000313|EMBL:KJF28665.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
NECEvent2014_3_5_scaffold_94_26
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28652..29668
DNA (1017bp) protein (339aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=84022 spec
Anthranilate phosphoribosyltransferase n=2 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=TRPD_ALKMQ rbh
trpD; anthranilate phosphoribosyltransferase
NECEvent2014_3_5_scaffold_94_27
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29665..30438
DNA (774bp) protein (258aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1H8_CLOCD
NECEvent2014_3_5_scaffold_94_28
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30440..31042
DNA (603bp) protein (201aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM75_ALKMQ
NECEvent2014_3_5_scaffold_94_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31039..32229
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=TRPB_ALKMQ rbh
NECEvent2014_3_5_scaffold_94_30
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32219..33016
DNA (798bp) protein (266aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=84022 species="Ba
trpA; tryptophan synthase alpha chain (EC:4.2.1.20) rbh
Tryptophan synthase alpha chain n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=TRPA_ALKMQ rbh
Displaying items 1-30 of 112 in total

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