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NECEvent2014_3_5_scaffold_94

Alias: 173_003_scaffold_94

Search features with annotation key words

Displaying items 31-60 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_94_31
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33028..33849
DNA (822bp) protein (274aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:KAJ51010.1}; EC=2.5.1.54 {ECO:0000313|EMBL:KAJ51010.1};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYA5_CLOA9
NECEvent2014_3_5_scaffold_94_32
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33904..35028
DNA (1125bp) protein (375aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXJ7_9CLOT rbh
NECEvent2014_3_5_scaffold_94_33
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35853..38837
DNA (2985bp) protein (995aa)
Microbial collagenase n=5 Tax=Bacillus cereus group RepID=C3A8S9_BACMY rbh
Collagenase family protein {ECO:0000313|EMBL:KIE46680.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 27
collagenase family protein
NECEvent2014_3_5_scaffold_94_34
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


39442..41391
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1Z695_9CLOT rbh
NECEvent2014_3_5_scaffold_94_35
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41404..42171
DNA (768bp) protein (256aa)
Metal-dependent DNase {ECO:0000313|EMBL:CCQ93250.1}; EC=3.1.21.- {ECO:0000313|EMBL:CCQ93250.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Metal-dependent DNase n=1 Tax=Clostridium ultunense Esp RepID=M1YRT9_9CLOT rbh
deoxyribonuclease, TatD Mg-dependent
NECEvent2014_3_5_scaffold_94_36
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42318..42866
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Clostridium ultunense Esp RepID=M1Z5F7_9CLOT
primase-like protein
NECEvent2014_3_5_scaffold_94_37
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


42856..43722
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium ultunense Esp RepID=M1ZHC4_9CLOT rbh
NECEvent2014_3_5_scaffold_94_38
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43753..45225
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATM9_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77208.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_3_5_scaffold_94_39
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45249..45617
DNA (369bp) protein (123aa)
HTH transcriptional regulator, ArsR family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA9_CLOA9
HTH transcriptional regulator, ArsR family
HTH transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFS77209.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain
NECEvent2014_3_5_scaffold_94_40
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45654..45920)
DNA (267bp) protein (89aa)
Putative Late competence development protein ComFB n=1 Tax=Clostridium ultunense Esp RepID=M1YRU4_9CLOT
Putative Late competence development protein ComFB {ECO:0000313|EMBL:CCQ93255.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
ComF operon protein; K02241 competence protein ComFB
NECEvent2014_3_5_scaffold_94_41
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46130..46360
DNA (231bp) protein (77aa)
glutaredoxin n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287C322
YruB family protein {ECO:0000313|EMBL:ERT58825.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
glutaredoxin
NECEvent2014_3_5_scaffold_94_42
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46415..46600)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00277.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
NECEvent2014_3_5_scaffold_94_43
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46758..47153
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWQ6_CLOA9
Membrane protein {ECO:0000313|EMBL:KGG80864.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
hypothetical protein
NECEvent2014_3_5_scaffold_94_44
unknown

Not on your lists

47438..47542
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_94_45
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48047..49384
DNA (1338bp) protein (446aa)
Mg2+ transporter mgtE n=1 Tax=Clostridium ultunense Esp RepID=M1ZA86_9CLOT rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
mgtE; Mg2+ transporter mgtE
NECEvent2014_3_5_scaffold_94_46
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49657..50292
DNA (636bp) protein (212aa)
Nucleoside recognition domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIV6_ALKOO
Nucleoside recognition protein {ECO:0000313|EMBL:KJF27437.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
nucleoside recognition domain-containing protein
NECEvent2014_3_5_scaffold_94_47
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50277..50813
DNA (537bp) protein (179aa)
Nucleoside recognition domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIV5_ALKOO
Spore maturation protein {ECO:0000313|EMBL:KJF27436.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
nucleoside recognition domain-containing protein
NECEvent2014_3_5_scaffold_94_48
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50976..52778)
DNA (1803bp) protein (601aa)
Predicted methyl-accepting chemotaxis protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZAS0_9CLOT rbh
Predicted methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCQ94793.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer rbh
NECEvent2014_3_5_scaffold_94_49
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53186..53521
DNA (336bp) protein (112aa)
Protein veg n=1 Tax=Clostridium ultunense Esp RepID=M1YTK0_9CLOT
Protein veg {ECO:0000313|EMBL:CCQ93885.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_scaffold_94_50
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53636..55183
DNA (1548bp) protein (516aa)
LysM domain-containing membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYC6_9CLOT rbh
Peptidoglycan-binding LysM {ECO:0000313|EMBL:KGG79937.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorens
peptidoglycan-binding LysM rbh
NECEvent2014_3_5_scaffold_94_51
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55256..56110
DNA (855bp) protein (285aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZIU9_9CLOT rbh
NECEvent2014_3_5_scaffold_94_52
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56118..56381
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z8K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93893.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_5_scaffold_94_53
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56393..57907
DNA (1515bp) protein (505aa)
Spore germination protein KA n=1 Tax=Clostridium ultunense Esp RepID=M1Z817_9CLOT rbh
Spore germination protein KA {ECO:0000313|EMBL:CCQ93894.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
spore germination protein GerA
NECEvent2014_3_5_scaffold_94_54
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57894..58988
DNA (1095bp) protein (365aa)
Putative Spore germination protein, amino acid permease n=1 Tax=Clostridium ultunense Esp RepID=M1YTK9_9CLOT rbh
Putative Spore germination protein, amino acid permease {ECO:0000313|EMBL:CCQ93895.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
spore germination protein
NECEvent2014_3_5_scaffold_94_55
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58985..60112
DNA (1128bp) protein (376aa)
Spore germination B3 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYM6_9CLOT
Spore germination B3 {ECO:0000313|EMBL:EOD01684.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiens
gerLC; spore germination protein GerLC
NECEvent2014_3_5_scaffold_94_56
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60298..60993
DNA (696bp) protein (232aa)
Stage II sporulation protein required for processing of pro-sigma-E (SpoIIR) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWV7_9CLOT
Stage II sporulation protein required for processing of pro-sigma-E (SpoIIR) {ECO:0000313|EMBL:EOD01683.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cald
stage II sporulation protein R
NECEvent2014_3_5_scaffold_94_57
unknown

Not on your lists

comp(60959..61213)
DNA (255bp) protein (85aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_94_58
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61335..61994
DNA (660bp) protein (220aa)
Spore cortex-lytic enzyme, lytic transglycosylase SleB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYB5_9CLOT rbh
Cell wall hydrolase {ECO:0000313|EMBL:KGG80134.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H532
sleB; spore cortex-lytic enzyme SleB
NECEvent2014_3_5_scaffold_94_59
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62006..63373
DNA (1368bp) protein (456aa)
Spore germination protein YpeB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSP6_9CLOT rbh
Spore germination protein YpeB {ECO:0000313|EMBL:EOD01681.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kir
ypeB; spore germination protein YpeB rbh
NECEvent2014_3_5_scaffold_94_60
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63532..64728
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z5B8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ93206.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein rbh
Displaying items 31-60 of 112 in total

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