ggKbase home page

NECEvent2014_3_5_scaffold_94_50

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 5
Location: 53636..55183

Top 3 Functional Annotations

Value Algorithm Source
LysM domain-containing membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYC6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 523.0
  • Bit_score: 425
  • Evalue 1.10e-115
  • rbh
Peptidoglycan-binding LysM {ECO:0000313|EMBL:KGG79937.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorens similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 523.0
  • Bit_score: 439
  • Evalue 7.70e-120
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 525.0
  • Bit_score: 380
  • Evalue 6.60e-103
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1548
ATGTCGATTGAGTTAATAAAAGATGTCTTACGGATTGAAGAACTAAGAGGAAAAGAAGACACCCAAGCCTTAGTAGAAACGGAAATTTACTTAAATCCATCAAAAGCAGATCTAGGGAAAGTACTTTGGACAGACGGTCTAGTAGAAATACTTAGTACTAAAGTAATAAGAGATAGGCTAGTAATATCAGGAGTAGTAAAATTTAAAGTAGTCTATAAATCACAAGAAGAGGAAAATAATATATATACAATAGATGCTAACGCAGATTTTAGAGAGGAAATAGAAATATCAGGGATTACGGAAGATATGTCAGCAACTATAAAATCTAATATTGAATACATAGAGGAAGAGATATTAGATGAGAGAAAATTATCTCTAAAGGCCCTAGTAAGTCTTGAAGGGAAAGTAGAGCAGGTCAATAATATAGAGATAATTAAGGATATAGGAGAAAAGCAAAACCTACAGACATTAAAAGAAACCATTAAGTATAAGGAGATTTATGGTAGAGAAACATCCTATGCTATTGTAAAGGAAGCTTTTGAAATAGGGGAAGAAAAGCCAGCAATGGAAGAAATACTTAAGATGACTATACAGGCTTACGAGCAGGAAGCCACAGTGGTAGAAGATAGAATAATAGTTTCGGGTATGGTAAACGCTAGGATAGTTTATTATGGAGAAAATAGAATTGCCACAGTGGAAGAGGAAATACCTTTCAATCATTTTTTAGAAATGCCCGGAGCATTAGCTGGAGCTCAGGAAGAACTTATGATAGAAGTGGTGGAAGGAAGCTATGAGGTATTGGAGAATGATGAAGGAGAACTTAAAATATTAGACATAGAAGCAAAACTAAGAATATCAGGTCTAGCTTATTCAGAAAATGAAAAAAATCTAATAGTAGATGCATATTCAACTAAGGAAAAAATTAAAATAGGAATAGGAGAAATTAATTTAATTGAAAACATAAAAAGCACAATTCACAGAGAAAATATATTGAAAGATTTGTCTGAGTATAGAATAAAGGAAATATATAATATATCAGGGCACCCAACTATTATAGACAGCAGAGTTGTAGATGATGAGCTAGTAGTAGAAGGGATTCTTTCATTACATGGAATTTATCTGGATTCTGATACTGATGAAATCAACACGTTGAGGGAGGAGATTCCATATAAATACTATTTACCTATGGAAGAAAAGGTAATAGATCCATTGATGGATATAAGTTTAGACTTAGAATCTATTAAATCAAATATGTCTAAAGATATATTTGTTATAGAAGGAACTATAAAACATAAAATAAAAATCAATAGAAATAGATTATTATCTGTAATAAATTCATTAGAAGAAACTGGAGAAATAATAGATAAGAAAAATCGTCCTAGCATAACAATTTATATAGTACAAAGAAATGATATATTATGGGATATAGCTAAAAGATATAATACAACAATAGAAGAAATATTACAGGCAAATGAAAATTTAAGTCCAAACAATATAATACCGGGAGAGAAAATAATCATTGAAAAAACAATAGATATATCTTTTTAA
PROTEIN sequence
Length: 516
MSIELIKDVLRIEELRGKEDTQALVETEIYLNPSKADLGKVLWTDGLVEILSTKVIRDRLVISGVVKFKVVYKSQEEENNIYTIDANADFREEIEISGITEDMSATIKSNIEYIEEEILDERKLSLKALVSLEGKVEQVNNIEIIKDIGEKQNLQTLKETIKYKEIYGRETSYAIVKEAFEIGEEKPAMEEILKMTIQAYEQEATVVEDRIIVSGMVNARIVYYGENRIATVEEEIPFNHFLEMPGALAGAQEELMIEVVEGSYEVLENDEGELKILDIEAKLRISGLAYSENEKNLIVDAYSTKEKIKIGIGEINLIENIKSTIHRENILKDLSEYRIKEIYNISGHPTIIDSRVVDDELVVEGILSLHGIYLDSDTDEINTLREEIPYKYYLPMEEKVIDPLMDISLDLESIKSNMSKDIFVIEGTIKHKIKINRNRLLSVINSLEETGEIIDKKNRPSITIYIVQRNDILWDIAKRYNTTIEEILQANENLSPNNIIPGEKIIIEKTIDISF*