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NECEvent2014_3_5_scaffold_349_15

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 11833..12291

Top 3 Functional Annotations

Value Algorithm Source
Methionine-tRNA ligase, beta subunit n=2 Tax=Atopobium RepID=N2BPN0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 302
  • Evalue 2.40e-79
  • rbh
Methionine-tRNA ligase, beta subunit {ECO:0000313|EMBL:EMZ40455.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 302
  • Evalue 3.30e-79
EMAP domain similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 152.0
  • Bit_score: 195
  • Evalue 8.90e-48

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGTGTGAAGAAACTTCTACGCCCAGCAGGTATCTTGTCGATAACCCCATTGAGCTTCAAGCAGAAACCAACTCTACTAAGCACGCTGATTCCCACATTGTAGTTGAGCCTCTTGCAGAAGAAGAGGTGGATTTTGAGACCTTTAGCAAGTCGGACTTTAGGGTTGTTAAGGTCAAAGAGTGCACGGCAGTTCCTAAGTCTAAAAAGCTGTTGAAGTTCGTGCTGGATGATGGCTCGGGAACCGACCGCATTATTCTCTCTGGCATTCATGCACAGTATGAGCCTGAAGAGCTCGTAGGAAAGACCCTTGTTGCCATTGTTAATCTCCTGCCACGTCGTATGATGGGCATTGATTCCTGTGGCATGATTATTTCTGCAATTCACCAAATAGATGATGAAGAAGGACTTAATGTATTGATGTTAGATGATACCATCCCTGCAGGGGCAAAGCTTTACTAG
PROTEIN sequence
Length: 153
MCEETSTPSRYLVDNPIELQAETNSTKHADSHIVVEPLAEEEVDFETFSKSDFRVVKVKECTAVPKSKKLLKFVLDDGSGTDRIILSGIHAQYEPEELVGKTLVAIVNLLPRRMMGIDSCGMIISAIHQIDDEEGLNVLMLDDTIPAGAKLY*