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NECEvent2014_3_5_scaffold_349

Alias: 173_003_scaffold_349

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_349_1
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1201)
DNA (1200bp) protein (400aa)
Transporter, major facilitator family protein n=2 Tax=Actinobacteria RepID=E1L2J3_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM87257.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
H+ antiporter protein
NECEvent2014_3_5_scaffold_349_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1513..2286)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PHA9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EWC94371.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
NECEvent2014_3_5_scaffold_349_3
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2582..2695
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PHB0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHM87259.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
NECEvent2014_3_5_scaffold_349_4
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3056..4165)
DNA (1110bp) protein (370aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; At
Cytosine-specific methyltransferase n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z5K4_9ACTN rbh
DNA-methyltransferase Dcm
NECEvent2014_3_5_scaffold_349_5
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4251..5885)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZR69_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB31348.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
hypothetical protein
NECEvent2014_3_5_scaffold_349_6
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5878..6138)
DNA (261bp) protein (87aa)
Putative transcriptional regulator XRE family n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZJF3_9ACTN
Putative transcriptional regulator XRE family {ECO:0000313|EMBL:CDD43529.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environm
NECEvent2014_3_5_scaffold_349_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6445..7452)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A852_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS81111.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
NECEvent2014_3_5_scaffold_349_8
unknown

Not on your lists

comp(7440..7664)
DNA (225bp) protein (75aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_349_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(7667..8047)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5API2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45290.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
NECEvent2014_3_5_scaffold_349_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8040..9164)
DNA (1125bp) protein (375aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNW4_9FIRM rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ91189.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminoc
Site-specific recombinase XerD
NECEvent2014_3_5_scaffold_349_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9154..9390)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8N2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91360.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris
hypothetical protein
NECEvent2014_3_5_scaffold_349_12
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9602..10087
DNA (486bp) protein (162aa)
Transcriptional regulator n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUU8_CLOSD
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBH20428.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium stickland
NECEvent2014_3_5_scaffold_349_13
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10135..11280
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B4D17F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV62397.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (
NECEvent2014_3_5_scaffold_349_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11432..11695)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJQ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40456.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_5_scaffold_349_15
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


11833..12291
DNA (459bp) protein (153aa)
Methionine-tRNA ligase, beta subunit n=2 Tax=Atopobium RepID=N2BPN0_9ACTN rbh
Methionine-tRNA ligase, beta subunit {ECO:0000313|EMBL:EMZ40455.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut
EMAP domain
NECEvent2014_3_5_scaffold_349_16
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12392..13129
DNA (738bp) protein (246aa)
PF14014 family protein n=2 Tax=Atopobium RepID=U2UBR8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40453.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_5_scaffold_349_17
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13119..13706
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BFB1_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40452.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_5_scaffold_349_18
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13973..15706)
DNA (1734bp) protein (578aa)
LPXTG cell wall anchor domain protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VTF0_9ACTN rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EMZ40451.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" sour
phage prohead protease, HK97 family
NECEvent2014_3_5_scaffold_349_19
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15669..15950)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BPM6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40450.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_5_scaffold_349_20
unknown

Not on your lists

16174..16350
DNA (177bp) protein (59aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_349_21
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16476..16916)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BUA0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40449.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
transcriptional regulator, MerR family protein
NECEvent2014_3_5_scaffold_349_22
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17225..18244
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BPK1_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40448.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
periplasmic solute binding protein
NECEvent2014_3_5_scaffold_349_23
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18262..19008
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BFA4_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40447.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
ABC transporter-like protein
NECEvent2014_3_5_scaffold_349_24
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19009..19878
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJP8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40446.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
ABC-3 protein
NECEvent2014_3_5_scaffold_349_25
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20014..20445)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BPM3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40445.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
ferritin Dps family protein
NECEvent2014_3_5_scaffold_349_26
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20472..20912)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BU90_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40444.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
Fur family ferric uptake regulator
NECEvent2014_3_5_scaffold_349_27
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21087..22223)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BPJ7_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ40443.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
membrane protein
NECEvent2014_3_5_scaffold_349_28
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22300..23502)
DNA (1203bp) protein (401aa)
HI0933 family flavoprotein n=2 Tax=Atopobium RepID=N2BF96_9ACTN rbh
HI0933 family flavoprotein {ECO:0000313|EMBL:EMZ40442.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006397
hypothetical protein
NECEvent2014_3_5_scaffold_349_29
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23776..24171
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ40441.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
Sel1 repeat protein
Displaying 29 items

View Taxonomy