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NECEvent2014_3_5_scaffold_556_8

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8667..9629)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 320.0
  • Bit_score: 634
  • Evalue 7.80e-179
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 328.0
  • Bit_score: 305
  • Evalue 2.20e-80
tRNA pseudouridine synthase B n=2 Tax=Atopobium RepID=N2BTJ7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 636
  • Evalue 1.90e-179
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GTGAAACGTTCTTCATCAGGGTTGCATGCGCTGTTGGCAATCGATAAACCCGTGGGTATGACAAGTCACGACGTAGTAAATAAGCTGCGTCGTGCTTTGCATGAACGCCGTATTGGCCATGCGGGAACTTTGGATCCCGATGCTTGTGGTGTGTTAGTGGTAGGGGTTGGTCAGGGCACCCGTCTTATGGGCTTGCTTTCTGCAGAGCGTAAGCGCTATCAGGCACGTATCTGTTTTGGCTCACAGACCTCTACGGATGATGCTGCAGGTAAAGTCATTGCTACGGCTCAGGTTCCTGAGCAGCTTTATGATCCAGACTTTGCCGCGCACACCATATTCGATCTTGTAGGAGAGCACCAGCAAGTGCCTCCCGCATACTCTGCCATTTCTGTTAATGGTAAGCGGGCGTATGATTTAGCGCGCAGTGGTAAGACGGTTGAACTTGCTGCGCGTACCATTCATATTTATGAGGCGTCACTTATCGGCATAAGTTCTGTACAGCCCCTGATTTGGGACGTAGATATTCTTGCTTCTAAGGGGACCTATATTCGCAGCATTGCTCGTGATGTGGGGCAACAGCTTGGTACGGCTGCTCATATCTGTGGCTTGCGTCGCATACAAAGCGGTAGGATCTCCATGGATGCGTGTACCCAGCTCGCCCAGCTGCAGTCCTTGGAAACACGTACAGAGGCCGAGCGCAAAGCAGCGCTGGAAGCCTTATGGCTCAATCCCCTGGCTGCTCTTGGGTATTATGTGCGCAGCTTGGACGATACGCAAATGGAAGCGGTGCGCTGTGGTCGTAAACTCTGGCTTACCCCTCAGGAATATAGCCTGTTACCAGTGGATCATCAGCGTGCCAGTTTAGTTTATAACAACAAGCTTGTTGGTGTGTGGGAGCGCGTGGGTAAGCACCTGGTCTGTGTGGCTAACTTTCCCGATGGTATAGAAGGAGTGCGTCTGTAA
PROTEIN sequence
Length: 321
VKRSSSGLHALLAIDKPVGMTSHDVVNKLRRALHERRIGHAGTLDPDACGVLVVGVGQGTRLMGLLSAERKRYQARICFGSQTSTDDAAGKVIATAQVPEQLYDPDFAAHTIFDLVGEHQQVPPAYSAISVNGKRAYDLARSGKTVELAARTIHIYEASLIGISSVQPLIWDVDILASKGTYIRSIARDVGQQLGTAAHICGLRRIQSGRISMDACTQLAQLQSLETRTEAERKAALEALWLNPLAALGYYVRSLDDTQMEAVRCGRKLWLTPQEYSLLPVDHQRASLVYNNKLVGVWERVGKHLVCVANFPDGIEGVRL*