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NECEvent2014_3_5_scaffold_1096_3

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(806..1753)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 619
  • Evalue 3.30e-174
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 315.0
  • Bit_score: 617
  • Evalue 2.60e-174
DNA-directed RNA polymerase subunit alpha n=19 Tax=Clostridium RepID=RPOA_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 315.0
  • Bit_score: 617
  • Evalue 9.00e-174
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTAGAAATAGAAAAGCCAAAAATAGAATGTGTTGAAAATGCTGAAGATGGTTCCTATGGTAAATTTGTCATTGAACCATTAGAAAGAGGTTATGGAATAACTCTTGGTAATGCTTTGAGAAGAATTCTTTTATCATCATTACCTGGAGTTGCTGCAGACCATATAAAAATTGATAGTGTTCTTCATGAGTTTTCAACAGTACAAGGTGTAAAAGAGGATGTTACAGAATTAATTCTTAACATCAAATGTTTAGCACTTACTATGAATGGAGAGGGTCCAAAAACTATATATATAGATGAAGTTGGACCTAAAGAAGTTACAGCAGCTGATATCAAAACAGACGGAGATGTTGAAGTAATAAACAAAGATTTACATATAGCAACCCTTGACGAAAATGGTAAAATGTATATGGAAATCAACGTTAATCGTGGTAGGGGCTATGTAACTCAAAATAAAAACAAAACTAAGGATATGTCAATAGGAAGTATAGCAGTGGATTCAATTTATACACCTGTTAAAAGAGTTAACTTTTCCGTTGAAAATACTAGAGTTGGCCAAATAACAGACTATGATAAATTGACTATAGAAGTTTGGACTAATGGAACTATAAGACCAGAAGAAGCTGTAAGTTTATCAGCTAAAATTCTTATAGAGCACTTTAAGTTATTTATGACTTTAACTGATCATGCAGATGATATGGAAATCATGGTTGAAAAAGAAGAAGATAAGAAAGAAAAGGTTCTAGAAATGACAATTGAAGAGCTAGATCTTTCAGTAAGAAGTTATAACTGCTTAAAGAGAGCTGGAATAAATACAGTTCAAGAACTATGCGAAAGAAGCATGGATGATATGATGAAAGTTAGAAACCTTGGTAAAAAGTCCTTAGAAGAAGTAGAACAAAAGTTAGAAGCTTTAGGATTAGGTTTAAGAAAAAGTGAAGATTAG
PROTEIN sequence
Length: 316
MLEIEKPKIECVENAEDGSYGKFVIEPLERGYGITLGNALRRILLSSLPGVAADHIKIDSVLHEFSTVQGVKEDVTELILNIKCLALTMNGEGPKTIYIDEVGPKEVTAADIKTDGDVEVINKDLHIATLDENGKMYMEINVNRGRGYVTQNKNKTKDMSIGSIAVDSIYTPVKRVNFSVENTRVGQITDYDKLTIEVWTNGTIRPEEAVSLSAKILIEHFKLFMTLTDHADDMEIMVEKEEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELCERSMDDMMKVRNLGKKSLEEVEQKLEALGLGLRKSED*