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NECEvent2014_3_5_scaffold_1096

Alias: 173_003_scaffold_1096

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_1096_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..330)
DNA (330bp) protein (110aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TEQ9_CLOSG
cobalt transporter ATP-binding subunit
NECEvent2014_3_5_scaffold_1096_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(421..762)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=3 Tax=Clostridium RepID=RL17_CLOBM
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_3_5_scaffold_1096_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(806..1753)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=19 Tax=Clostridium RepID=RPOA_CLOB1 rbh
NECEvent2014_3_5_scaffold_1096_4
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1821..2441)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=2 Tax=Clostridium sporogenes RepID=G9F334_CLOSG rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15
rpsD; 30S ribosomal protein S4
NECEvent2014_3_5_scaffold_1096_5
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2476..2874)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=2 Tax=Clostridium sporogenes RepID=G9F335_CLOSG
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1
rpsK; 30S ribosomal protein S11
NECEvent2014_3_5_scaffold_1096_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2892..3263)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=18 Tax=Clostridium RepID=RS13_CLOB1
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36
NECEvent2014_3_5_scaffold_1096_7
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3371..3484)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=189 Tax=Firmicutes RepID=RL36_CLOAB
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_3_5_scaffold_1096_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3501..3719)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=20 Tax=Clostridium RepID=IF1_CLOB1
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulin
NECEvent2014_3_5_scaffold_1096_9
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3664..4008)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F339_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU39060.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
Displaying 9 items

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