ggKbase home page

NECEvent2014_3_5_scaffold_1096_6

Organism: NECEvent2014_3_5_Clostridium_sporogenes-rel_28_5

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2892..3263)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=18 Tax=Clostridium RepID=RS13_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 6.30e-62
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 1.80e-62
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 8.70e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 372
ATGGCAAGAATTTCAGGTATAGACCTACCAAAAGAAAAAAGAGTAGAAATCGGTCTAACATATATATACGGAATTGGCTTACCAACTTCTCAAGAAATATTAAAAGCTACTGGAGTAAATCCAGATACAAGAGTTAAAGACTTATCAGAAGAAGAAGTTAATGCAATCAGAGATTACGTTAATAAAAATGTAAAAGTTGAAGGTGACTTAAGAAGAGAAATTAAACTTAACATAAAGAGATTAGTTGAAATTGGATCTTATAGAGGAATAAGACATAGAAGAAACCTTCCAGTTAGAGGTCAAAAGACTAAGACTAACGCTAGAACAAGAAAAGGTCCAAAGAGAGCTATAGGTGGAAAGAAGAAAAAATAA
PROTEIN sequence
Length: 124
MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILKATGVNPDTRVKDLSEEEVNAIRDYVNKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGPKRAIGGKKKK*