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NECEvent2014_3_6_scaffold_26_1

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(1..201)

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Pseudomonas aeruginosa MTB-1 RepID=V5SW40_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 139
  • Evalue 9.00e-31
Porin B {ECO:0000313|EMBL:CDH77313.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 139
  • Evalue 1.60e-30
glucose-sensitive porin similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 7.40e-31

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
GTGAAATCCCATCTTCTCCGTCCGGCCCTGCGCCCCGTGGCGGGCAGCCTGCTGTCCGCCTCCCTGCTGTGCAACGCGGCGCACGCCGCCGAGGCGTTCTCGCCGAACTCGAAATGGATGCTCGGCGATTGGGGCGGCAAGCGCACCGAGCTGCTGGAGAAGGGCTACGACTTCAAGCTGGAGTACGTCGGCGAGGCGGCG
PROTEIN sequence
Length: 67
VKSHLLRPALRPVAGSLLSASLLCNAAHAAEAFSPNSKWMLGDWGGKRTELLEKGYDFKLEYVGEAA