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NECEvent2014_3_6_scaffold_26

Alias: 173_004_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_26_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..201)
DNA (201bp) protein (67aa)
Porin n=1 Tax=Pseudomonas aeruginosa MTB-1 RepID=V5SW40_PSEAI
Porin B {ECO:0000313|EMBL:CDH77313.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
glucose-sensitive porin
NECEvent2014_3_6_scaffold_26_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542..823)
DNA (282bp) protein (94aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=K1CT37_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV68500.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_26_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(820..1785)
DNA (966bp) protein (322aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=K1CKK3_PSEAI rbh
phycobiliprotein
PBS lyase {ECO:0000313|EMBL:AHB55976.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
NECEvent2014_3_6_scaffold_26_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1782..1988)
DNA (207bp) protein (69aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=S0I9A0_PSEAI
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EVT85885.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
NECEvent2014_3_6_scaffold_26_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2123..2368)
DNA (246bp) protein (82aa)
Ferredoxin n=126 Tax=Pseudomonas RepID=M9S823_PSEAI
4Fe-4S ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:CDH77310.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_26_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2454..4178)
DNA (1725bp) protein (575aa)
Oxidoreductase n=17 Tax=Pseudomonas RepID=M9RZS8_PSEAI rbh
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:ERV68496.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL0
NECEvent2014_3_6_scaffold_26_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4175..4924)
DNA (750bp) protein (250aa)
GntR family transcriptional regulator n=19 Tax=Pseudomonas RepID=G4LI21_PSEAI rbh
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:CDH77308.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_26_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5101..6552)
DNA (1452bp) protein (484aa)
Chitinase n=5 Tax=Pseudomonas aeruginosa RepID=Q02M97_PSEAB rbh
chiC; chitinase
Chitinase {ECO:0000313|EMBL:CDH77307.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
NECEvent2014_3_6_scaffold_26_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6771..7313)
DNA (543bp) protein (181aa)
Uncharacterized protein n=120 Tax=Pseudomonas RepID=Q9I1H4_PSEAE rbh
tRNA synthetase
Uncharacterized protein {ECO:0000313|EMBL:AHW71165.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_26_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7381..13758)
DNA (6378bp) protein (2126aa)
AmbE n=5 Tax=Pseudomonas aeruginosa RepID=K1CHZ9_PSEAI rbh
non-ribosomal peptide synthetase
Putative non-ribosomal peptide synthetase {ECO:0000313|EMBL:BAQ39935.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_26_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13778..14797)
DNA (1020bp) protein (340aa)
Protein AmbD n=9 Tax=Pseudomonas aeruginosa RepID=V5SW31_PSEAI rbh
regulatory protein
Protein AmbD {ECO:0000313|EMBL:AHB55968.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1
NECEvent2014_3_6_scaffold_26_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14794..15882)
DNA (1089bp) protein (363aa)
Protein AmbC n=6 Tax=Pseudomonas aeruginosa RepID=V5SXX5_PSEAI rbh
regulatory protein
Protein AmbC {ECO:0000313|EMBL:AHB55967.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1
NECEvent2014_3_6_scaffold_26_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15911..19660)
DNA (3750bp) protein (1250aa)
Non-ribosomal peptide synthetase n=9 Tax=Pseudomonas RepID=S0IP46_PSEAI rbh
mxaA; non-ribosomal peptide synthetase
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:ERV68489.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
NECEvent2014_3_6_scaffold_26_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19756..20373)
DNA (618bp) protein (206aa)
Amino acid transporter n=59 Tax=Pseudomonas RepID=G4LI29_PSEAI rbh
lysine transporter LysE
Amino acid transporter LysE {ECO:0000313|EMBL:ERV68488.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
NECEvent2014_3_6_scaffold_26_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20483..21349)
DNA (867bp) protein (289aa)
ABC transporter permease n=30 Tax=Pseudomonas RepID=V5SWW5_PSEAI rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CDH77300.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
NECEvent2014_3_6_scaffold_26_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21366..22214)
DNA (849bp) protein (283aa)
ATP-binding component of ABC transporter n=9 Tax=Pseudomonas aeruginosa RepID=K1CIY3_PSEAI rbh
ABC transporter ATP-binding protein
ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHW71158.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
NECEvent2014_3_6_scaffold_26_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22222..23244)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=82 Tax=Pseudomonas RepID=Q9I1G6_PSEAE rbh
putative ABC transporter, periplasmic binding protein
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EQL40564.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
NECEvent2014_3_6_scaffold_26_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23285..24172)
DNA (888bp) protein (296aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CTC2_PSEAI rbh
tauD; taurine catabolism dioxygenase
Taurine catabolism dioxygenase {ECO:0000313|EMBL:ETU82659.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
NECEvent2014_3_6_scaffold_26_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24462..24620
DNA (159bp) protein (53aa)
Uncharacterized protein n=117 Tax=Pseudomonas RepID=B7V912_PSEA8
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH46138.1}; Uncharacterized protein {ECO:0000313|EMBL:CEI21065.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
NECEvent2014_3_6_scaffold_26_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24624..25256
DNA (633bp) protein (211aa)
XRE family transcriptional regulator n=93 Tax=Pseudomonas RepID=G4LI35_PSEAI rbh
2-hydroxyacid dehydrogenase
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ETD46370.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
NECEvent2014_3_6_scaffold_26_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25332..25835)
DNA (504bp) protein (168aa)
Uncharacterized protein n=8 Tax=Pseudomonas aeruginosa RepID=S0I842_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EQL40565.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
NECEvent2014_3_6_scaffold_26_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26134..27387)
DNA (1254bp) protein (418aa)
Major facilitator superfamily (MFS) transporter n=5 Tax=Pseudomonas aeruginosa RepID=K1D8K4_PSEAI rbh
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:BAQ39921.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
NECEvent2014_3_6_scaffold_26_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27387..28562)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CTB9_PSEAI rbh
beta lactamase
Beta-lactamase {ECO:0000313|EMBL:AHB55956.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB
NECEvent2014_3_6_scaffold_26_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28680..29573
DNA (894bp) protein (298aa)
Transcriptional regulator n=5 Tax=Pseudomonas aeruginosa RepID=K1CKS3_PSEAI rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ETD46374.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_26_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29677..30975
DNA (1299bp) protein (433aa)
FAD dependent oxidoreductase n=77 Tax=Pseudomonas RepID=R9ZFI1_PSEAI rbh
putative oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:ERV68477.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL0
NECEvent2014_3_6_scaffold_26_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31008..31373
DNA (366bp) protein (122aa)
Cupin superfamily protein n=87 Tax=Pseudomonas RepID=G4LI41_PSEAI
Putative cytoplasmic protein
Uncharacterized protein {ECO:0000313|EMBL:ETD46377.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_26_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31595..32626)
DNA (1032bp) protein (344aa)
Transcriptional regulator GntR n=37 Tax=Pseudomonas RepID=E3A2V6_PSEAI rbh
LacI family transcription regulator
Transcriptional regulator GntR {ECO:0000313|EMBL:EZP02779.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
NECEvent2014_3_6_scaffold_26_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32821..33342
DNA (522bp) protein (174aa)
Gluconokinase {ECO:0000313|EMBL:BAQ39914.1}; EC=2.7.1.12 {ECO:0000313|EMBL:BAQ39914.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomona
Gluconokinase n=5 Tax=Pseudomonas aeruginosa RepID=Q02MB7_PSEAB rbh
gntK, gntV, gnuK; gluconokinase
NECEvent2014_3_6_scaffold_26_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33439..34791
DNA (1353bp) protein (451aa)
Gluconate permease n=94 Tax=Pseudomonas RepID=GNUT_PSEAE rbh
Gluconate transporter
Gluconate permease {ECO:0000313|EMBL:ERV68473.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_26_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34817..34960
DNA (144bp) protein (48aa)
Uncharacterized protein n=19 Tax=Pseudomonas aeruginosa RepID=S0IN28_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV68472.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Displaying items 1-30 of 105 in total

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