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NECEvent2014_3_6_scaffold_34_1

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3..197)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock domain protein CspD n=2 Tax=Pseudomonas aeruginosa RepID=A6V4G4_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 65.0
  • Bit_score: 137
  • Evalue 4.30e-30
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 65.0
  • Bit_score: 137
  • Evalue 1.20e-30
Cold-shock protein {ECO:0000313|EMBL:EQL40133.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 65.0
  • Bit_score: 137
  • Evalue 6.10e-30

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGCTCAGCGGTAAGGTCAAGTGGTTCAACAACGCCAAGGGCTACGGGTTCATCCTGGCCGAGGGCCGAGATGAGGACCTGTTCGCCCATTACTCGGCCATTCAGATGGACGGTTACAAGACACTCAAGGCGGGCCAGCCGGTCAATTTCGAGATCATCCAGGGACCGAAGGGACTGCATGCCATCAACATCAGC
PROTEIN sequence
Length: 65
MLSGKVKWFNNAKGYGFILAEGRDEDLFAHYSAIQMDGYKTLKAGQPVNFEIIQGPKGLHAINIS