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NECEvent2014_3_6_scaffold_34

Alias: 173_004_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_34_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)
Cold shock domain protein CspD n=2 Tax=Pseudomonas aeruginosa RepID=A6V4G4_PSEA7
cold-shock protein
Cold-shock protein {ECO:0000313|EMBL:EQL40133.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_34_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423..791
DNA (369bp) protein (123aa)
ATP-dependent Clp protease adapter protein ClpS n=113 Tax=Pseudomonas RepID=CLPS_PSEA7
clpS; ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
NECEvent2014_3_6_scaffold_34_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

819..3095
DNA (2277bp) protein (759aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=124 Tax=Pseudomonas RepID=A6V4G6_PSEA7 rbh
clpA; ATP-dependent Clp protease ATP-binding protein
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:ERV82922.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
NECEvent2014_3_6_scaffold_34_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3177..3395)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=289 Tax=Pseudomonadaceae RepID=IF1_PSE14
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
NECEvent2014_3_6_scaffold_34_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4207)
DNA (708bp) protein (236aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase n=47 Tax=Pseudomonas RepID=ATE_PSEA8 rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
NECEvent2014_3_6_scaffold_34_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4262..4942)
DNA (681bp) protein (227aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000255|HAMAP-Rule:MF_00688}; EC=2.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00688};; L/F-transferase {ECO:0000255|HAMAP-Rule:MF_00688}; Leucyltransferase {EC
Leucyl/phenylalanyl-tRNA--protein transferase n=15 Tax=Pseudomonas aeruginosa RepID=LFTR_PSEAB rbh
NECEvent2014_3_6_scaffold_34_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4980..5930)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Thioredoxin reductase n=89 Tax=Pseudomonas RepID=B7UW06_PSEA8 rbh
thioredoxin reductase
NECEvent2014_3_6_scaffold_34_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6158..8593
DNA (2436bp) protein (812aa)
Cell division protein FtsK n=2 Tax=Pseudomonas aeruginosa RepID=A3LD68_PSEAI rbh
ftsK; cell division protein FtsK
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76910.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
NECEvent2014_3_6_scaffold_34_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8619..9245
DNA (627bp) protein (209aa)
Outer-membrane lipoprotein carrier protein n=130 Tax=Pseudomonas RepID=LOLA_PSEA8 rbh
membrane protein
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps
NECEvent2014_3_6_scaffold_34_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9255..10580
DNA (1326bp) protein (442aa)
ATPase AAA n=10 Tax=Pseudomonas aeruginosa RepID=V5SVT7_PSEAI rbh
ycaJ; recombination factor protein RarA
ATPase AAA {ECO:0000313|EMBL:AHB55650.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;
NECEvent2014_3_6_scaffold_34_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10702..11982
DNA (1281bp) protein (427aa)
Seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=89 Tax=Pseudomonas RepID=SYS_PSEA8 rbh
NECEvent2014_3_6_scaffold_34_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11984..13381
DNA (1398bp) protein (466aa)
Siroheme synthase n=5 Tax=Pseudomonas aeruginosa RepID=CYSG_PSEAB rbh
cysG; siroheme synthase
Siroheme synthase {ECO:0000255|HAMAP-Rule:MF_01646}; Includes:; Uroporphyrinogen-III C-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01646}; Short=Urogen III methylase {ECO:0000255|HAMAP-Rule:MF_01646}
NECEvent2014_3_6_scaffold_34_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13386..14360)
DNA (975bp) protein (325aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CKD6_PSEAI rbh
yqjG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ39543.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
NECEvent2014_3_6_scaffold_34_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14448..15431)
DNA (984bp) protein (328aa)
Uncharacterized protein n=53 Tax=Pseudomonas aeruginosa RepID=M9S770_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD45816.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_34_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15428..15763)
DNA (336bp) protein (112aa)
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Sulfurtransferase n=56 Tax=Pseudomonas RepID=E2ZUU4_PSEAI
hypothetical protein
NECEvent2014_3_6_scaffold_34_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15760..16065)
DNA (306bp) protein (102aa)
Uncharacterized protein n=109 Tax=Pseudomonas RepID=G4LKR0_PSEAI
tRNA 5-methylaminomethyl-2-thiouridine synthase TusB
Sulfur relay protein TusB/DsrH {ECO:0000313|EMBL:ERV82935.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
NECEvent2014_3_6_scaffold_34_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..16424)
DNA (360bp) protein (120aa)
Protein TusC homolog n=107 Tax=Pseudomonas RepID=TUSC_PSEAE
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC
Sulfur relay protein TusC/DsrF {ECO:0000313|EMBL:EZP05871.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
NECEvent2014_3_6_scaffold_34_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16421..16816)
DNA (396bp) protein (132aa)
Sulfur transfer complex subunit TusD {ECO:0000313|EMBL:CKH33877.1}; EC=2.8.1.- {ECO:0000313|EMBL:CKH33877.1};; Sulfurtransferase {ECO:0000313|EMBL:AKE69492.1}; TaxID=287 species="Bacteria; Proteobacte
Sulfurtransferase TusD homolog n=86 Tax=Pseudomonas aeruginosa RepID=TUSD_PSEAE
sulfurtransferase
NECEvent2014_3_6_scaffold_34_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16927..17595)
DNA (669bp) protein (223aa)
Uncharacterized protein PA2604 n=126 Tax=Pseudomonas RepID=Y2604_PSEAE rbh
HflBKC-binding inner membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDH76928.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_34_trna_1
unknown

Not on your lists

17725..17811
DNA (87bp)
transferRNA
NECEvent2014_3_6_scaffold_34_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17949..19532)
DNA (1584bp) protein (528aa)
Thiosulfate sulfurtransferase n=5 Tax=Pseudomonas aeruginosa RepID=Q02N95_PSEAB rbh
thiosulfate sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
NECEvent2014_3_6_scaffold_34_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19529..20134)
DNA (606bp) protein (202aa)
Uncharacterized protein n=26 Tax=Pseudomonas aeruginosa RepID=M9S0J2_PSEAI rbh
putative enzyme
Cysteine dioxygenase {ECO:0000313|EMBL:ETD45748.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
NECEvent2014_3_6_scaffold_34_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20247..21143
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=64 Tax=Pseudomonas RepID=G4LKQ4_PSEAI rbh
Transcriptional regulator, LysR family
Uncharacterized protein {ECO:0000313|EMBL:CDH76931.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_34_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21462..22550
DNA (1089bp) protein (363aa)
Alkanesulfonate monooxygenase n=63 Tax=Pseudomonas RepID=M1YHM6_PSEAI rbh
putative flavin-dependent oxidoreductase
Flavin-dependent oxidoreductase {ECO:0000313|EMBL:ETU96893.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
NECEvent2014_3_6_scaffold_34_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22560..23504
DNA (945bp) protein (315aa)
Sulfonate ABC transporter substrate-binding protein n=27 Tax=Pseudomonas RepID=V5SW06_PSEAI rbh
putative periplasmic aliphatic sulfonate-binding protein
Sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD45745.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
NECEvent2014_3_6_scaffold_34_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23514..24596
DNA (1083bp) protein (361aa)
Uncharacterized protein n=10 Tax=Pseudomonas aeruginosa RepID=K1CMG1_PSEAI rbh
lavin-dependent oxidoreductase rbh
Alkanesulfonate monooxygenase {ECO:0000313|EMBL:ETD45744.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_3_6_scaffold_34_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24601..25752
DNA (1152bp) protein (384aa)
Uncharacterized protein n=10 Tax=Pseudomonas RepID=K1CQM2_PSEAI rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZP05880.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
NECEvent2014_3_6_scaffold_34_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25860..26846
DNA (987bp) protein (329aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1DAB2_PSEAI rbh
periplasmic aliphatic sulfonate-binding protein
Periplasmic aliphatic sulfonate-binding protein {ECO:0000313|EMBL:EZP05881.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" s
NECEvent2014_3_6_scaffold_34_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26858..27814
DNA (957bp) protein (319aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CKE4_PSEAI rbh
periplasmic aliphatic sulfonate-binding protein
Putative periplasmic aliphatic sulfonate-binding protein {ECO:0000313|EMBL:CKH34371.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
NECEvent2014_3_6_scaffold_34_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27970..28929
DNA (960bp) protein (320aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CJR8_PSEAI rbh
ssuA; periplasmic aliphatic sulfonate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EQL40374.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
Displaying items 1-30 of 95 in total

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