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NECEvent2014_3_6_scaffold_46_27

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(29629..30894)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane porin, OprD family protein n=101 Tax=Pseudomonas RepID=T2E739_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 854
  • Evalue 3.40e-245
  • rbh
porin similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 854
  • Evalue 9.70e-246
Porin {ECO:0000313|EMBL:CDH76357.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 854
  • Evalue 4.80e-245

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAGCATGACCCCGATCGCCCGTGCCGTGGCTTTTGCCGCGCTGGGTTCCAGCATTACCGTCCCAACCCTGGCCCATGCCGAGTTCATCAAGGACAGCAAGGCCAGCATCGAACTCCGCAACTTCTACTTCAACCGTGATTTCCGCCAGGAAGGCGCCAGCCAGTCCAAGGCCGAGGAATGGGCCCAGGGCTTCCTCCTGCGCTACGAGTCCGGCTACACCGAGGGCACCATCGGTTTCGGCGTCGACGCCATCGGCCTGCTCGGGGTGAAGCTCGACTCCAGCCCCGACCGCAGCGGCACCGGCCTGCTCAAGCGCGACCGCGAGACCGGCCGCGCCCAGGACGACTATGGCGAGGCAGGGATCACCGCCAAGCTGCGGGCGTCGAAGAGCACCCTGAAGATCGGCACCCTGACCCCCAAGCTGCCGGTGATCATGCCCAACGACAGCCGCCTGCTGCCACAGACCTTCCAGGGCGGCGCGCTGAACTCCATGGAGATCGACGGCCTGACCCTCGACGCCGGGCGCCTGAAGAAGGTCAACCAGCGCGACTCCTCGGACAACGAGGACATGACCATCACCGGTGGCGGCAAGCGCAACATCGTGGTCCGTTCCGGGCTGACTTCGGACAAGTTCGACTTCGCCGGCGGCAGCTACAAGTGGACCGACAACCTCAGCACCAGCTACCACTACGGCAAGCTCGACAACTTCTACAAGCAGCATTACCTCGGCCTGGTGCACACCCTGCCGATCGCCGACAAGCAGTCGCTGAAATCCGACATCCGCTGGGCGCGCTCCACCGACGACGGCTCCAGCAACGTCGACAACAAGGCGCTCAACGCCATGTTCACCTACAGCCTCGGCTACCACGCCTTCGGCGTCGGCTACCAGAAGATGAGCGGCGACACCGGCTTCGCCTACATCAACGGCGCCGACCCCTACCTGGTGAACTTCATCCAGATCGGCGACTTCGCCAACAAGGACGAGAAATCCTGGCAGGCGCGCTACGACTACAACTTCGCAGGCGTCGGCATTCCCGGCCTGACCTTCATGACCCGCTACGTCAAGGGCGACAACATCGACCTGCTGACCACCTCGGGCGAAGGCAAGGAATGGGAACGCGACATGGACATCGCCTACGTGTTCCAGAGCGGCCCGTTGAAGAACCTCGGGGTGAAGTGGCGCAACGCGACCATGCGCACCAACTACACCAACGACTACGACGAAAATCGCCTGATCGTCAGCTACACGCTGCCGCTCTGGTAA
PROTEIN sequence
Length: 422
MSMTPIARAVAFAALGSSITVPTLAHAEFIKDSKASIELRNFYFNRDFRQEGASQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKLDSSPDRSGTGLLKRDRETGRAQDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRNIVVRSGLTSDKFDFAGGSYKWTDNLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGSSNVDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGADPYLVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNYTNDYDENRLIVSYTLPLW*