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NECEvent2014_3_6_scaffold_46

Alias: 173_004_scaffold_46

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_46_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..537
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8L0C3_PSEAI
pelA; hypothetical protein
PelA protein {ECO:0000313|EMBL:CKH17196.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
NECEvent2014_3_6_scaffold_46_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

515..4096
DNA (3582bp) protein (1194aa)
PelB n=5 Tax=Pseudomonas aeruginosa RepID=K1CLU3_PSEAI rbh
pelB; hypothetical protein
Biofilm formation protein PelB {ECO:0000313|EMBL:AKE68826.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ae
NECEvent2014_3_6_scaffold_46_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4136..4654
DNA (519bp) protein (173aa)
Lipoprotein n=132 Tax=Pseudomonas RepID=M9S3Y8_PSEAI rbh
transporter
Lipoprotein {ECO:0000313|EMBL:ERV82177.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;
NECEvent2014_3_6_scaffold_46_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4660..6027
DNA (1368bp) protein (456aa)
PelD n=5 Tax=Pseudomonas aeruginosa RepID=K1CP59_PSEAI rbh
pelD; hypothetical protein
Sugar transporter {ECO:0000313|EMBL:AHB55163.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_46_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6005..6994
DNA (990bp) protein (330aa)
Uncharacterized protein n=10 Tax=Pseudomonas aeruginosa RepID=B7UVY7_PSEA8 rbh
pelE; hypothetical protein
Transporter {ECO:0000313|EMBL:AKE68829.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
NECEvent2014_3_6_scaffold_46_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6991..8514
DNA (1524bp) protein (508aa)
Uncharacterized protein n=65 Tax=Pseudomonas RepID=I6SUM7_PSEAI rbh
pelF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU96379.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8516..9886
DNA (1371bp) protein (457aa)
PelG n=11 Tax=Pseudomonas aeruginosa RepID=Q02PM3_PSEAB rbh
OmpR family response regulator
OmpR family response regulator {ECO:0000313|EMBL:AHB55166.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
NECEvent2014_3_6_scaffold_46_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..10157)
DNA (231bp) protein (77aa)
Uncharacterized protein n=119 Tax=Pseudomonas RepID=B7UVZ0_PSEA8
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH17395.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ38848.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
NECEvent2014_3_6_scaffold_46_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10283..10759
DNA (477bp) protein (159aa)
Uncharacterized protein n=10 Tax=Pseudomonas aeruginosa RepID=V5STR6_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB55168.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10797..11273
DNA (477bp) protein (159aa)
Uncharacterized protein n=14 Tax=Pseudomonas RepID=T2EDY8_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU96383.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11390..13294)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1DBU8_PSEAI rbh
carboxypeptidase
Peptidase {ECO:0000313|EMBL:EQL40000.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.
NECEvent2014_3_6_scaffold_46_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13462..14463)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=42 Tax=Pseudomonas aeruginosa RepID=M9S5T3_PSEAI rbh
hypothetical protein
Hydrolytic enzyme {ECO:0000313|EMBL:ERV82186.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_46_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15416)
DNA (882bp) protein (294aa)
Uncharacterized protein n=9 Tax=Pseudomonas aeruginosa RepID=K1CLC2_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU96386.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15509..15790
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CP72_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV82188.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15847..16875
DNA (1029bp) protein (343aa)
Dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=11 Tax=Pseudomonas aeruginosa RepID=PYRD_PSEAB rbh
NECEvent2014_3_6_scaffold_46_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16963..17175)
DNA (213bp) protein (71aa)
Ribosome modulation factor n=91 Tax=Pseudomonas RepID=A6V326_PSEA7
ribosome modulation factor
Ribosome modulation factor {ECO:0000256|HAMAP-Rule:MF_00919}; Short=RMF {ECO:0000256|HAMAP-Rule:MF_00919};; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseud
NECEvent2014_3_6_scaffold_46_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17636..19813
DNA (2178bp) protein (726aa)
Ribosomal RNA large subunit methyltransferase K/L n=12 Tax=Pseudomonas aeruginosa RepID=R9ZQ69_PSEAI rbh
rlmL; 23S rRNA methyltransferase
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadale
NECEvent2014_3_6_scaffold_46_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19883..21313)
DNA (1431bp) protein (477aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AKE68842.1}; Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CKH17634.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CKH17634.1};; TaxID=287 spe
D-alanyl-D-alanine carboxypeptidase n=5 Tax=Pseudomonas aeruginosa RepID=K1CLC5_PSEAI rbh
dacB; D-alanyl-D-alanine carboxypeptidase
NECEvent2014_3_6_scaffold_46_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21624..21968
DNA (345bp) protein (115aa)
Uncharacterized protein n=126 Tax=Pseudomonas RepID=B7UWM3_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV82193.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22395..23018
DNA (624bp) protein (208aa)
Two-component response regulator n=132 Tax=Pseudomonas RepID=M9S089_PSEAI rbh
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETD45461.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_46_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23032..25257
DNA (2226bp) protein (742aa)
Two-component sensor n=6 Tax=Pseudomonas aeruginosa RepID=K1DBV7_PSEAI rbh
two-component sensor
Putative two-component sensor {ECO:0000313|EMBL:CDH76351.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_3_6_scaffold_46_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25268..26599)
DNA (1332bp) protein (444aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=130 Tax=Pseudomonas RepID=DGTL2_PSEA8 rbh
deoxyguanosinetriphosphate triphosphohydrolase
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01213}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
NECEvent2014_3_6_scaffold_46_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26716..27039)
DNA (324bp) protein (108aa)
Uncharacterized protein n=18 Tax=Pseudomonas RepID=V5SVP1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD45458.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27053..27433)
DNA (381bp) protein (127aa)
Uncharacterized protein n=128 Tax=Pseudomonas RepID=G4LP56_PSEAI
membrane protein
Membrane protein {ECO:0000313|EMBL:AKE68848.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77691.1}; Putative transmembrane protein {ECO:0000313|EMBL:BAR66925.1}; Uncharacteriz
NECEvent2014_3_6_scaffold_46_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27437..27766)
DNA (330bp) protein (110aa)
Uncharacterized protein n=133 Tax=Pseudomonas RepID=A6V336_PSEA7
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AHB55184.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa M
NECEvent2014_3_6_scaffold_46_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28236..29444
DNA (1209bp) protein (403aa)
Transporter n=2 Tax=Pseudomonas aeruginosa RepID=K1DBW2_PSEAI rbh
ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:ETU96399.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
NECEvent2014_3_6_scaffold_46_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29629..30894)
DNA (1266bp) protein (422aa)
Outer membrane porin, OprD family protein n=101 Tax=Pseudomonas RepID=T2E739_PSEAI rbh
porin
Porin {ECO:0000313|EMBL:CDH76357.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
NECEvent2014_3_6_scaffold_46_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31063..31929)
DNA (867bp) protein (289aa)
Uncharacterized protein n=22 Tax=Pseudomonas RepID=K1BQR9_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP05143.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_46_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31929..32861)
DNA (933bp) protein (311aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CP90_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ38870.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
NECEvent2014_3_6_scaffold_46_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32878..33474)
DNA (597bp) protein (199aa)
Glutathione S-transferase n=38 Tax=Pseudomonas RepID=R9ZGX4_PSEAI rbh
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:EVT85239.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
Displaying items 1-30 of 73 in total

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