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NECEvent2014_3_6_scaffold_88_19

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(17403..18038)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=37 Tax=Pseudomonas RepID=E2ZX03_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 440
  • Evalue 7.80e-121
  • rbh
rluA; pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 440
  • Evalue 2.20e-121
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ETD45120.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 440
  • Evalue 1.10e-120

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCCGCTGTCCCAGATTCGAATCGTTCACCAGGATGACGCCCTGCTGGTGGTCGACAAGCCCACCCTGCTGCTGTCGGTGCCCGGCCGCGCCGATGACAACAAGGACTGCCTGGTCACCCGCCTGCAGGAAAACGGCTATCCCGAGGCCCGCATCGTCCACCGCCTGGACTGGGAAACCTCCGGCCTGATGGTGCTCGCCCGCGACGCCGACAGCCACCGCGAGCTGTCCCGCCAGTTCCACGACCGCGAGACCGAGAAAGCCTATACCGCCCTTTGCTGGGGCCTGCCGGAACTGGACAGCGGGCGCATCGAACTGCCGCTGCGCTACGACCCGCCGACCAAGCCGCGTCACGTGGTGGACTTCGAGCACGGCCGCCACGCCCTGACCTTCTGGCGTGTGGTCGAGCGTCATGAGCGCTGGAGCAGGGTCGAGCTGACGCCGATCACCGGCCGTTCGCACCAGTTGCGCGTGCACATGCTCTCCATCGGCCATCCGCTGCTCGGCGACCGCCTCTACGCCAACCCCGAAGCCCTCGCCGCCCACGAACGCCTGTGCCTGCACGCCAGCCTGCTGTGCCTGACCCATCCGCAGAGCGGCGAACGCCTGCGCTTCGAGTCGCCGGCGCCGTTCTGA
PROTEIN sequence
Length: 212
MPLSQIRIVHQDDALLVVDKPTLLLSVPGRADDNKDCLVTRLQENGYPEARIVHRLDWETSGLMVLARDADSHRELSRQFHDRETEKAYTALCWGLPELDSGRIELPLRYDPPTKPRHVVDFEHGRHALTFWRVVERHERWSRVELTPITGRSHQLRVHMLSIGHPLLGDRLYANPEALAAHERLCLHASLLCLTHPQSGERLRFESPAPF*