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NECEvent2014_3_6_scaffold_88

Alias: 173_004_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_88_trna_1
unknown

Not on your lists

21..94
DNA (74bp)
transferRNA
NECEvent2014_3_6_scaffold_88_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354..1115
DNA (762bp) protein (254aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Peptidyl-prolyl cis-trans isomerase n=126 Tax=Pseudomonas RepID=B7V7V7_PSEA8 rbh
NECEvent2014_3_6_scaffold_88_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1485..1916
DNA (432bp) protein (144aa)
Uncharacterized protein n=41 Tax=Pseudomonas RepID=G4LQ79_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD45137.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1904..2650)
DNA (747bp) protein (249aa)
Uncharacterized protein n=38 Tax=Pseudomonas RepID=G4LQ78_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU96120.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2754..3065
DNA (312bp) protein (104aa)
Transcriptional regulator n=8 Tax=Pseudomonas aeruginosa RepID=K1CY41_PSEAI
transcriptional regulator
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:AKE68632.1}; Putative transcriptional regulator {ECO:0000313|EMBL:CKH11883.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteri
NECEvent2014_3_6_scaffold_88_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3074..3433
DNA (360bp) protein (120aa)
Uncharacterized protein n=71 Tax=Pseudomonas RepID=A6V2G1_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH76151.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3423..3902
DNA (480bp) protein (160aa)
TPR repeat, SEL1 subfamily n=46 Tax=Pseudomonas RepID=U6A992_PSEAI rbh
TPR repeat-containing protein, SEL1 subfamily
Uncharacterized protein {ECO:0000313|EMBL:ETU96123.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3916..5664)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=K1CMP6_PSEAI rbh
EAL domain/GGDEF domain-containing protein
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AHB54958.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_3_6_scaffold_88_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..7889)
DNA (2130bp) protein (710aa)
Periplasmic tail-specific protease n=124 Tax=Pseudomonas RepID=G4LQ74_PSEAI rbh
tsp; periplasmic tail-specific protease
Periplasmic tail-specific protease {ECO:0000313|EMBL:EZP04926.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
NECEvent2014_3_6_scaffold_88_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7986..8948
DNA (963bp) protein (321aa)
NAD(P)H quinone oxidoreductase n=34 Tax=Pseudomonas RepID=V5STU8_PSEAI rbh
NAD(P)H quinone oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAQ38647.1}; Quinone oxidoreductase {ECO:0000313|EMBL:BAR66709.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomo
NECEvent2014_3_6_scaffold_88_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9015..9665)
DNA (651bp) protein (217aa)
Phosphoserine phosphatase (EC:3.1.3.3)
HAD hydrolase, family IB n=6 Tax=Pseudomonas aeruginosa RepID=S0IEW6_PSEAI rbh
Putative HAD-superfamily hydrolase {ECO:0000313|EMBL:AHW70169.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
NECEvent2014_3_6_scaffold_88_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9665..10660)
DNA (996bp) protein (332aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CDH76155.1}; EC=3.6.3.31 {ECO:0000313|EMBL:CDH76155.1};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; P
ATP-binding component of ABC transporter n=9 Tax=Pseudomonas aeruginosa RepID=K1DCU9_PSEAI rbh
ABC transporter ATP-binding protein
NECEvent2014_3_6_scaffold_88_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10663..11460)
DNA (798bp) protein (266aa)
ABC transporter permease n=118 Tax=Pseudomonas RepID=M9RZK0_PSEAI rbh
Thiamin ABC transporter, transmembrane component
ABC transporter permease {ECO:0000313|EMBL:ERV81990.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
NECEvent2014_3_6_scaffold_88_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11447..12286)
DNA (840bp) protein (280aa)
ABC transporter permease n=94 Tax=Pseudomonas RepID=M9RX20_PSEAI rbh
ABC transporter permease protein
ABC transporter permease {ECO:0000313|EMBL:CDH76157.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
NECEvent2014_3_6_scaffold_88_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12283..13092)
DNA (810bp) protein (270aa)
Uncharacterized protein n=11 Tax=Pseudomonas RepID=K1CQC1_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP04932.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..14205)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=118 Tax=Pseudomonas RepID=G4LQ67_PSEAI rbh
putative ABC transporter periplasmic substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ETU96132.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_88_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14569..15285
DNA (717bp) protein (239aa)
Transcriptional regulator n=109 Tax=Pseudomonas RepID=G4LQ66_PSEAI rbh
2-aminoethylphosphonate uptake and metabolism regulator
Transcriptional regulator {ECO:0000313|EMBL:EZP04934.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
NECEvent2014_3_6_scaffold_88_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15351..15902
DNA (552bp) protein (184aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CMQ2_PSEAI rbh
hypothetical protein
Ribosomal-protein-serine acetyltransferase {ECO:0000313|EMBL:ETD45122.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
NECEvent2014_3_6_scaffold_88_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15945..17234)
DNA (1290bp) protein (430aa)
Probable M18 family aminopeptidase 2 {ECO:0000256|HAMAP-Rule:MF_00467}; EC=3.4.11.- {ECO:0000256|HAMAP-Rule:MF_00467};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomona
Probable M18 family aminopeptidase 2 n=37 Tax=Pseudomonas RepID=APEB_PSEAB rbh
aminopeptidase
NECEvent2014_3_6_scaffold_88_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17403..18038)
DNA (636bp) protein (212aa)
Pseudouridine synthase n=37 Tax=Pseudomonas RepID=E2ZX03_PSEAI rbh
rluA; pseudouridine synthase
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ETD45120.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
NECEvent2014_3_6_scaffold_88_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18142..18396)
DNA (255bp) protein (85aa)
Cell division topological specificity factor n=134 Tax=Pseudomonas RepID=MINE_PSEA7
cell division topological specificity factor
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
NECEvent2014_3_6_scaffold_88_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18393..19208)
DNA (816bp) protein (272aa)
Site-determining protein n=130 Tax=Pseudomonas RepID=B7V7X5_PSEA8 rbh
cell division inhibitor MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ae
NECEvent2014_3_6_scaffold_88_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19270..20061)
DNA (792bp) protein (264aa)
Probable septum site-determining protein MinC n=16 Tax=Pseudomonas aeruginosa RepID=MINC_PSEAB rbh
minC; septum formation inhibitor
Probable septum site-determining protein MinC {ECO:0000255|HAMAP-Rule:MF_00267}; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
NECEvent2014_3_6_scaffold_88_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20221..21159
DNA (939bp) protein (313aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; Tax
Lipid A biosynthesis lauroyl acyltransferase n=36 Tax=Pseudomonas RepID=G4LQ59_PSEAI rbh
htrB; lipid A biosynthesis lauroyl acyltransferase
NECEvent2014_3_6_scaffold_88_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21227..22396
DNA (1170bp) protein (390aa)
Uncharacterized protein n=112 Tax=Pseudomonas RepID=G4LQ58_PSEAI rbh
patatin
Patatin {ECO:0000313|EMBL:ETD45115.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
NECEvent2014_3_6_scaffold_88_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22460..23092)
DNA (633bp) protein (211aa)
Pirin-like protein n=1 Tax=Pseudomonas aeruginosa E2 RepID=K1E8L4_PSEAI rbh
Pirin
Pirin-like protein {ECO:0000313|EMBL:ERV82003.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_88_26
unknown

Not on your lists

comp(23322..23639)
DNA (318bp) protein (106aa)

This feature has no annotations

NECEvent2014_3_6_scaffold_88_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23981..24289)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AVY0_PSEAI
Uncharacterized protein; TaxID=1400868 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA04.;"
NECEvent2014_3_6_scaffold_88_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25597..26292)
DNA (696bp) protein (232aa)
Possible resolvase n=5 Tax=Pseudomonas aeruginosa RepID=Q02Q70_PSEAB rbh
resolvase
Resolvase {ECO:0000313|EMBL:CDH76170.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
NECEvent2014_3_6_scaffold_88_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26629..27729)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1DCW1_PSEAI rbh
hypothetical protein
Strain 2-79 PFLU3_contig000010, whole genome shotgun sequence {ECO:0000313|EMBL:KIR22938.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudo
Displaying items 1-30 of 36 in total

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