ggKbase home page

NECEvent2014_3_6_scaffold_238

Alias: 173_004_scaffold_238

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_238_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..1957)
DNA (1956bp) protein (652aa)
Protein kinase n=16 Tax=Staphylococcus epidermidis RepID=Q8CSV9_STAES rbh
Serine/threonine protein kinase PrkC, regulator of stationary phase
Kinase domain protein {ECO:0000313|EMBL:EFE59486.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_6_scaffold_238_2
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1954..2697)
DNA (744bp) protein (248aa)
Protein phosphatase 2C n=39 Tax=Staphylococcus epidermidis RepID=C5Q8K6_STAEP rbh
Protein serine/threonine phosphatase PrpC,regulation of stationary phase
Phosphoprotein phosphatase {ECO:0000313|EMBL:ETJ12772.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_3_6_scaffold_238_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2704..3798)
DNA (1095bp) protein (365aa)
Ribosomal RNA large subunit methyltransferase N (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=39 Tax=Staphylococcus epidermidis RepID=RLMN_STAES rbh
NECEvent2014_3_6_scaffold_238_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3801..5108)
DNA (1308bp) protein (436aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylo
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E5R8_STAEP rbh
RNA-binding Sun protein
NECEvent2014_3_6_scaffold_238_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5105..6037)
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1403935 species="
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0K9A9_STAEP rbh
NECEvent2014_3_6_scaffold_238_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6030..6518)
DNA (489bp) protein (163aa)
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase-like n=66 Tax=Staphylococcus epidermidis RepID=DEFL_STAEQ rbh
NECEvent2014_3_6_scaffold_238_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6740..6943
DNA (204bp) protein (68aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HPX7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54198.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_3_6_scaffold_238_8

Not on your lists

comp(7049..7732)
DNA (684bp) protein (228aa)
Primosomal protein N n=2 Tax=Staphylococcus epidermidis RepID=J0PXL4_STAEP
priA; primosomal protein N'
Uncharacterized protein {ECO:0000313|EMBL:ETJ17502.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 8 items

View Taxonomy