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NECEvent2014_3_6_scaffold_271

Alias: 173_004_scaffold_271

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_271_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
TrmH family tRNA/rRNA methyltransferase YacO (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=16 Tax=Staphylococcus epidermidis RepID=H0DW22_STAEP
RNA methyltransferase {ECO:0000313|EMBL:ESV18623.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_3_6_scaffold_271_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(400..786)
DNA (387bp) protein (129aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
Mini-ribonuclease 3 n=17 Tax=Staphylococcus epidermidis RepID=J0FZP7_STAEP
Small protein similar to cysteinyl-tRNA synthetase
NECEvent2014_3_6_scaffold_271_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(791..2191)
DNA (1401bp) protein (467aa)
cysS; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteine--tRNA ligase; Cysteinyl-
Cysteine--tRNA ligase n=4 Tax=Staphylococcus epidermidis RepID=H3WS28_STAEP rbh
NECEvent2014_3_6_scaffold_271_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2175..2804)
DNA (630bp) protein (210aa)
Serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase; Short=SAT;; EC=2.3.1.30;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Serine acetyltransferase n=61 Tax=Staphylococcus epidermidis RepID=CYSE_STAEQ rbh
NECEvent2014_3_6_scaffold_271_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3188..4642)
DNA (1455bp) protein (485aa)
Glutamyl-tRNA synthetase @ Glutamyl-tRNA(Gln) synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
Glutamate--tRNA ligase n=44 Tax=Staphylococcus epidermidis RepID=SYE_STAEQ rbh
NECEvent2014_3_6_scaffold_271_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5052..6128)
DNA (1077bp) protein (359aa)
PIN domain protein n=11 Tax=Staphylococcus RepID=Q5HRM6_STAEQ rbh
twitching motility protein PilT
PIN domain protein {ECO:0000313|EMBL:EFE58339.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_6_scaffold_271_7

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comp(6164..6292)
DNA (129bp) protein (43aa)
DNA repair protein radA n=5 Tax=Staphylococcus epidermidis RepID=H3UZZ4_STAEP
DNA repair protein RadA
DNA repair protein radA {ECO:0000313|EMBL:ETJ20444.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 7 items

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