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NECEvent2014_3_6_scaffold_286

Alias: 173_004_scaffold_286

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_286_1

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comp(2..319)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=J0HX91_STAEP
Hypothetical protein SAV2132
Uncharacterized protein {ECO:0000313|EMBL:ETJ42961.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_6_scaffold_286_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(319..1503)
DNA (1185bp) protein (395aa)
Amidase n=34 Tax=Staphylococcus epidermidis RepID=Q8CNI1_STAES rbh
HmrA protein involved in methicillin resistance / amidohydrolase of M40 family
Amidohydrolase {ECO:0000313|EMBL:EFE60177.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_6_scaffold_286_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1731..2201
DNA (471bp) protein (157aa)
S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000255|HAMAP-Rule:MF_00091}; EC=4.4.1.21 {ECO:0000255|HAMAP-Rule:MF_00091};; AI-2 synthesis protein {ECO:0000255|HAMAP-Rule:MF_00091}; Autoinducer-2 production protei
S-ribosylhomocysteine lyase n=73 Tax=Staphylococcus epidermidis RepID=LUXS_STAEQ rbh
NECEvent2014_3_6_scaffold_286_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2352..2702)
DNA (351bp) protein (117aa)
Uncharacterized protein n=66 Tax=Staphylococcus epidermidis RepID=Q8CRM0_STAES
Hypothetical protein SAV2135
Uncharacterized protein {ECO:0000313|EMBL:EES37306.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_3_6_scaffold_286_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2699..3892)
DNA (1194bp) protein (398aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=8 Tax=Staphylococcus epidermidis RepID=F3SYF8_STAEP rbh
NECEvent2014_3_6_scaffold_286_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3902..5203)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase; Short=PYNP;; EC=2.4.2.2;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228)
Pyrimidine-nucleoside phosphorylase n=9 Tax=Staphylococcus epidermidis RepID=H3VGR1_STAEP rbh
NECEvent2014_3_6_scaffold_286_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5236..5808)
DNA (573bp) protein (191aa)
Deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=8 Tax=Staphylococcus epidermidis RepID=H3V3E2_STAEP rbh
Displaying 7 items

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