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NECEvent2014_4_1_scaffold_3

Alias: 174_001_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_3_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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237..581
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3A1A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY20712.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
NECEvent2014_4_1_scaffold_3_2
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

718..897
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3AVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD80244.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
NECEvent2014_4_1_scaffold_3_3
unknown

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1006..1482
DNA (477bp) protein (159aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_3_4
unknown

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1498..2034
DNA (537bp) protein (179aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_3_5
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2137..3042
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZU59_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD80243.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
NECEvent2014_4_1_scaffold_3_6
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3317..3769
DNA (453bp) protein (151aa)
UPI0003D5D312 related cluster n=1 Tax=unknown RepID=UPI0003D5D312
Uncharacterized protein {ECO:0000313|EMBL:ETJ15241.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
NECEvent2014_4_1_scaffold_3_7
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3966..4547
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZV19_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD80241.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
NECEvent2014_4_1_scaffold_3_8
unknown

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4746..5132
DNA (387bp) protein (129aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_3_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5429..6232
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Veillonella parvula RepID=D1BMQ7_VEIPT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQC65665.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;
hypothetical protein
NECEvent2014_4_1_scaffold_3_10

Not on your lists

6225..6686
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KYS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ34086.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_3_11
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6783..8102
DNA (1320bp) protein (440aa)
Amidohydrolase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCD3_9FIRM rbh
Amidohydrolase {ECO:0000313|EMBL:EFR60625.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0
amidohydrolase
NECEvent2014_4_1_scaffold_3_12
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8416..9291
DNA (876bp) protein (292aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FQP6_9FIRM rbh
glycyl-tRNA synthetase subunit alpha
NECEvent2014_4_1_scaffold_3_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9293..11344
DNA (2052bp) protein (684aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
Glycine--tRNA ligase beta subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FQP7_9FIRM rbh
glycyl-tRNA synthetase subunit beta
NECEvent2014_4_1_scaffold_3_14
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11491..11862
DNA (372bp) protein (124aa)
MarR family protein n=1 Tax=Veillonella sp. ACP1 RepID=J4JG17_9FIRM
MarR family protein {ECO:0000313|EMBL:EJO49916.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
MarR family transcriptional regulator
NECEvent2014_4_1_scaffold_3_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


12036..12377
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=6 Tax=Veillonella RepID=D1BMP8_VEIPT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
50S ribosomal protein L19
NECEvent2014_4_1_scaffold_3_16
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12472..13377
DNA (906bp) protein (302aa)
Ribosome biogenesis GTPase A n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHW9_9FIRM rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44
GTP-binding protein HSR1-like protein
NECEvent2014_4_1_scaffold_3_17
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13370..14170
DNA (801bp) protein (267aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Veillonella sp. ACP1 RepID=J4JG18_9FIRM rbh
ribonuclease HII/HIII
NECEvent2014_4_1_scaffold_3_18
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14343..14744
DNA (402bp) protein (134aa)
UPF0102 protein HMPREF9321_0516 n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6X2_9FIRM
UPF0102 protein HMPREF9321_0516 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypi
hypothetical protein
NECEvent2014_4_1_scaffold_3_19
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14756..16327
DNA (1572bp) protein (524aa)
Mg chelatase-like protein n=1 Tax=Veillonella sp. ACP1 RepID=J4JFZ6_9FIRM rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EJO49811.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Mg chelatase subunit ChlI
NECEvent2014_4_1_scaffold_3_20
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16311..17447
DNA (1137bp) protein (379aa)
DNA protecting protein DprA n=1 Tax=Veillonella sp. ACP1 RepID=J5AP20_9FIRM rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EJO49913.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
DNA protecting protein DprA
NECEvent2014_4_1_scaffold_3_21
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17437..19755
DNA (2319bp) protein (773aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=866776 species="Bacteria; Firmicutes
DNA topoisomerase 1 n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6X5_9FIRM rbh
DNA topoisomerase I
NECEvent2014_4_1_scaffold_3_22
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19748..21064
DNA (1317bp) protein (439aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransfera
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Veillonella atypica KON RepID=L1PZ15_9FIRM rbh
hypothetical protein
NECEvent2014_4_1_scaffold_3_23
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21166..22002)
DNA (837bp) protein (279aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=866778
Prolipoprotein diacylglyceryl transferase n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LAP5_9FIRM rbh
prolipoprotein diacylglyceryl transferase
NECEvent2014_4_1_scaffold_3_24
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22134..23756
DNA (1623bp) protein (541aa)
Glycosyl hydrolase, family 18 n=1 Tax=Veillonella sp. ACP1 RepID=J4JFY1_9FIRM rbh
Glycosyl hydrolase, family 18 {ECO:0000313|EMBL:EJO49736.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
glycoside hydrolase
NECEvent2014_4_1_scaffold_3_25
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


23838..26306
DNA (2469bp) protein (823aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1203593 species="Bacteria; Firmic
Leucine--tRNA ligase n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZV05_9FIRM rbh
leucyl-tRNA synthetase
NECEvent2014_4_1_scaffold_3_26
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26390..26869
DNA (480bp) protein (160aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=3 Tax=Veillonella RepID=E1L6Y0_9FIRM rbh
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EUB26643.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" so
CMP/dCMP deaminase zinc-binding protein
NECEvent2014_4_1_scaffold_3_27
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26993..28222)
DNA (1230bp) protein (410aa)
Thermophilic metalloprotease (M29) n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6Y1_9FIRM rbh
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EFL55903.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypic
peptidase M29 aminopeptidase II
NECEvent2014_4_1_scaffold_3_28
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28346..28996
DNA (651bp) protein (217aa)
ComEA protein n=1 Tax=Veillonella atypica KON RepID=L1PZX2_9FIRM rbh
ComEA protein {ECO:0000313|EMBL:EKY20995.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
competence protein ComEA
NECEvent2014_4_1_scaffold_3_29
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28956..31148
DNA (2193bp) protein (731aa)
ComEC/Rec2-like protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6Y3_9FIRM rbh
ComEC/Rec2-like protein {ECO:0000313|EMBL:EFL55913.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V
cyclic nucleotide-binding protein
NECEvent2014_4_1_scaffold_3_30
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31145..32143
DNA (999bp) protein (333aa)
Putative DNA polymerase III, delta subunit n=1 Tax=Veillonella atypica KON RepID=L1PZ67_9FIRM rbh
Putative DNA polymerase III, delta subunit {ECO:0000313|EMBL:EKY20993.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
DNA polymerase III subunit delta
Displaying items 1-30 of 234 in total

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