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NECEvent2014_4_1_scaffold_28

Alias: 174_001_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_28_1
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(347..556)
DNA (210bp) protein (70aa)
TOBE domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCK8_9FIRM
Putative molybdenum-pterin-binding protein 2 {ECO:0000313|EMBL:ETS93701.1}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
TOBE domain-containing protein
NECEvent2014_4_1_scaffold_28_trna_1
unknown

Not on your lists

comp(658..728)
DNA (71bp)
transferRNA
NECEvent2014_4_1_scaffold_28_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

865..2190
DNA (1326bp) protein (442aa)
PepSY domain protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LCG2_9FIRM rbh
PepSY domain protein {ECO:0000313|EMBL:EFL57668.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Co
PepSY-associated TM helix domain-containing protein
NECEvent2014_4_1_scaffold_28_3
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2343..3497
DNA (1155bp) protein (385aa)
Na(+)/H(+) antiporter NhaA n=5 Tax=Veillonella RepID=L1PWA4_9FIRM rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadale
Na+/H+ antiporter NhaA
NECEvent2014_4_1_scaffold_28_4
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3526..4698
DNA (1173bp) protein (391aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Veillonella sp. ACP1 RepID=J4RR33_9FIRM rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadale
Na+/H+ antiporter NhaA
NECEvent2014_4_1_scaffold_28_5
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4723..5319
DNA (597bp) protein (199aa)
3D domain protein n=2 Tax=Veillonella RepID=J4JG92_9FIRM rbh
3D domain protein {ECO:0000313|EMBL:EJO50291.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_4_1_scaffold_28_6
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5487..6311
DNA (825bp) protein (275aa)
Pur operon repressor PurR n=5 Tax=Veillonella RepID=L1PWI8_9FIRM rbh
Pur operon repressor PurR {ECO:0000313|EMBL:EPD79872.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
purine operon repressor, PurR
NECEvent2014_4_1_scaffold_28_7
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6321..7694
DNA (1374bp) protein (458aa)
Bifunctional protein GlmU n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L858_9FIRM rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
UDP-N-acetylglucosamine pyrophosphorylase
NECEvent2014_4_1_scaffold_28_8
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7834..8787
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=4 Tax=Veillonella RepID=E1L859_9FIRM rbh
ribose-phosphate pyrophosphokinase
NECEvent2014_4_1_scaffold_28_9
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8798..9376
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=5 Tax=Veillonella RepID=E1L860_9FIRM rbh
peptidyl-tRNA hydrolase
NECEvent2014_4_1_scaffold_28_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9435..10916
DNA (1482bp) protein (494aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L861_9FIRM rbh
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFL55476.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill
Orn/Lys/Arg decarboxylase major region
NECEvent2014_4_1_scaffold_28_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10919..11605
DNA (687bp) protein (229aa)
dTMP kinase n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L862_9FIRM rbh
dTMP kinase {ECO:0000313|EMBL:EFL55470.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
thymidylate kinase
NECEvent2014_4_1_scaffold_28_12
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11695..12735
DNA (1041bp) protein (347aa)
DNA polymerase III, delta subunit n=3 Tax=Veillonella RepID=J5AQH2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD79878.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
DNA polymerase III subunits gamma/tau
NECEvent2014_4_1_scaffold_28_13
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12736..13581
DNA (846bp) protein (282aa)
PSP1 C-terminal domain protein n=4 Tax=Veillonella RepID=E1L864_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD79879.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
PSP1 domain-containing protein
NECEvent2014_4_1_scaffold_28_14
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13574..14302
DNA (729bp) protein (243aa)
Methyltransferase small domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L865_9FIRM rbh
Methyltransferase small domain protein {ECO:0000313|EMBL:EFL55466.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella at
methyltransferase small
NECEvent2014_4_1_scaffold_28_15
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14289..15134
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L866_9FIRM rbh
uroporphyrin-III C/tetrapyrrole methyltransferase
NECEvent2014_4_1_scaffold_28_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


15169..17118
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L867_9FIRM rbh
methionyl-tRNA synthetase
NECEvent2014_4_1_scaffold_28_17
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17118..17888
DNA (771bp) protein (257aa)
Hydrolase, TatD family n=2 Tax=Veillonella RepID=E1LCH7_9FIRM rbh
TatD family hydrolase {ECO:0000313|EMBL:EPD79883.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
TatD family hydrolase
NECEvent2014_4_1_scaffold_28_18
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17923..19575
DNA (1653bp) protein (551aa)
Putative exopolyphosphatase n=1 Tax=Veillonella atypica KON RepID=L1PWB7_9FIRM rbh
Putative exopolyphosphatase {ECO:0000313|EMBL:EKY20008.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.
Ppx/GppA phosphatase
NECEvent2014_4_1_scaffold_28_19
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19585..21135
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3A0B2_9FIRM rbh
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EUB20801.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. I
Exopolyphosphatase-like protein
NECEvent2014_4_1_scaffold_28_20
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21128..23254
DNA (2127bp) protein (709aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Veillonella sp. ACP1 RepID=J4QEQ6_9FIRM rbh
polyphosphate kinase
NECEvent2014_4_1_scaffold_28_21
unknown

Not on your lists

23494..23631
DNA (138bp) protein (46aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_28_22
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23670..24641
DNA (972bp) protein (324aa)
3D domain protein n=2 Tax=Veillonella RepID=J4JGB0_9FIRM rbh
3D domain protein {ECO:0000313|EMBL:EJO50381.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_4_1_scaffold_28_23
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24761..25696)
DNA (936bp) protein (312aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Veillonella sp. ACP1 RepID=J5AQM2_9FIRM rbh
methionine-R-sulfoxide reductase
NECEvent2014_4_1_scaffold_28_24
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25697..26818)
DNA (1122bp) protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EJO50402.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EJO50402.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
Methionine synthase, vitamin-B12 independent n=1 Tax=Veillonella sp. ACP1 RepID=J4RRE8_9FIRM rbh
vitamin-B12 independent methionine synthase
NECEvent2014_4_1_scaffold_28_25
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26952..27617
DNA (666bp) protein (222aa)
Transposase-like protein n=5 Tax=Veillonella RepID=E1L5V2_9FIRM rbh
Transposase-like protein {ECO:0000313|EMBL:EFL56277.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-
Transposase and inactivated derivatives
NECEvent2014_4_1_scaffold_28_26
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27792..28727)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Veillonella sp. ACP1 RepID=J4RR71_9FIRM rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EJO50302.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp
MarR family transcriptional regulator
NECEvent2014_4_1_scaffold_28_27
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28836..29366
DNA (531bp) protein (177aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=5 Tax=Veillonella RepID=E1L876_9FIRM rbh
primase/topoisomerase-like protein
NECEvent2014_4_1_scaffold_28_28
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


29424..30278
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Veillonella RepID=J4JG95_9FIRM rbh
dimethyladenosine transferase
NECEvent2014_4_1_scaffold_28_29
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30353..31813)
DNA (1461bp) protein (487aa)
Sodium/glutamate symporter n=5 Tax=Veillonella RepID=S2ZSX1_9FIRM rbh
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EKY19999.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atyp
sodium/glutamate symporter
Displaying items 1-30 of 113 in total

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