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NECEvent2014_4_1_scaffold_31

Alias: 174_001_scaffold_31

Search features with annotation key words

Displaying items 91-113 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_31_91
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96175..96441
DNA (267bp) protein (89aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CX84_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB81394.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_31_92
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96434..96736
DNA (303bp) protein (101aa)
Ribosomal protein L7Ae family protein n=7 Tax=Clostridium perfringens RepID=H7CX83_CLOPF
Ribosomal protein, L7Ae family {ECO:0000313|EMBL:EDT13816.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
ribosomal protein L7Ae family protein
NECEvent2014_4_1_scaffold_31_93
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96767..98806
DNA (2040bp) protein (680aa)
Translation initiation factor IF-2 n=9 Tax=Clostridium perfringens RepID=IF2_CLOP1 rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
infB; translation initiation factor IF-2
NECEvent2014_4_1_scaffold_31_94
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98828..99178
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=10 Tax=Clostridium perfringens RepID=RBFA_CLOP1
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rbfA; ribosome-binding factor A
NECEvent2014_4_1_scaffold_31_95
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99182..100135
DNA (954bp) protein (318aa)
DHH subfamily 1 protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSD6_CLOPS rbh
DHH subfamily 1 protein {ECO:0000313|EMBL:ABG86219.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
DHH subfamily 1 protein
NECEvent2014_4_1_scaffold_31_96
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

100139..101023
DNA (885bp) protein (295aa)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthas
tRNA pseudouridine synthase B n=2 Tax=Clostridium perfringens RepID=TRUB_CLOPE rbh
truB; tRNA pseudouridine synthase B
NECEvent2014_4_1_scaffold_31_97
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101027..101956
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=451754 species="Bacteria; Firmicutes;
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=3 Tax=Clostridium perfringens RepID=Q0TPS1_CLOP1 rbh
NECEvent2014_4_1_scaffold_31_98
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


102072..102335
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=11 Tax=Clostridium perfringens RepID=RS15_CLOP1
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsO; 30S ribosomal protein S15
NECEvent2014_4_1_scaffold_31_99
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

102427..104535
DNA (2109bp) protein (703aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=451756
Polyribonucleotide nucleotidyltransferase n=3 Tax=Clostridium perfringens RepID=PNP_CLOPE rbh
pnpA; polynucleotide phosphorylase
NECEvent2014_4_1_scaffold_31_100
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104670..104945
DNA (276bp) protein (92aa)
PRC-barrel domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CX75_CLOPF
PRC-barrel domain protein {ECO:0000313|EMBL:EDT26228.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
PRC-barrel domain-containing protein
NECEvent2014_4_1_scaffold_31_101
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104959..106155
DNA (1197bp) protein (399aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
aspartate kinase I (EC:2.7.2.4)
Aspartokinase n=7 Tax=Clostridium perfringens RepID=H7CX74_CLOPF rbh
NECEvent2014_4_1_scaffold_31_102
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106209..106898
DNA (690bp) protein (230aa)
Putative endopeptidase {ECO:0000313|EMBL:ABG87261.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABG87261.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
clpP; Clp protease (EC:3.4.21.92)
Clp protease n=4 Tax=Clostridium perfringens RepID=B1BG34_CLOPF rbh
NECEvent2014_4_1_scaffold_31_103
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107030..109420
DNA (2391bp) protein (797aa)
DNA translocase FtsK n=2 Tax=Clostridium perfringens RepID=Q0TPS7_CLOP1 rbh
DNA translocase FtsK {ECO:0000313|EMBL:EDT22751.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 36
ftsK; DNA translocase FtsK
NECEvent2014_4_1_scaffold_31_104
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109489..110826
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO n=9 Tax=Clostridium perfringens RepID=RIMO_CLOP1 rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
tRNA modifying protein
NECEvent2014_4_1_scaffold_31_105
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110810..111400
DNA (591bp) protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=7 Tax=Clostridium perfringens RepID=H7CX70_CLOPF rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EIA16525.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
NECEvent2014_4_1_scaffold_31_106
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


111536..112594
DNA (1059bp) protein (353aa)
Protein RecA n=9 Tax=Clostridium perfringens RepID=RECA_CLOP1 rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=451756 species="Bacteria; Firmicute
recA; recombinase A
NECEvent2014_4_1_scaffold_31_107
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112942..114477
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000255|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000255|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00335};; TaxID=195102 species="Bacteria; Firmicutes; Clostridi
Ribonuclease Y n=7 Tax=Clostridium perfringens RepID=RNY_CLOP1 rbh
phosphodiesterase
NECEvent2014_4_1_scaffold_31_108
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114695..114955
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=11 Tax=Clostridium perfringens RepID=H7CX67_CLOPF
Stage V sporulation protein S {ECO:0000313|EMBL:EDT13823.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
spoVS; stage V sporulation protein S
NECEvent2014_4_1_scaffold_31_109
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115108..116301
DNA (1194bp) protein (398aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EIA16521.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EIA16521.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=2 Tax=Clostridium perfringens RepID=H7CX66_CLOPF rbh
NECEvent2014_4_1_scaffold_31_110
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

116396..116656
DNA (261bp) protein (87aa)
Phosphocarrier protein (Hpr) n=11 Tax=Clostridium perfringens RepID=H7CX65_CLOPF
Phosphocarrier protein {ECO:0000313|EMBL:BAB81375.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 /
hpr; phosphocarrier protein
NECEvent2014_4_1_scaffold_31_111
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

116899..118329
DNA (1431bp) protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=8 Tax=Clostridium perfringens RepID=H7CX64_CLOPF rbh
NECEvent2014_4_1_scaffold_31_112
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118613..118942
DNA (330bp) protein (110aa)
Single-stranded DNA-binding protein n=9 Tax=Clostridium perfringens RepID=H7CX63_CLOPF
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
single-strand DNA binding protein
NECEvent2014_4_1_scaffold_31_113
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118979..119593)
DNA (615bp) protein (205aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XJT7_CLOPE rbh
Putative DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EIA16517.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
DNA polymerase III subunit epsilon
Displaying items 91-113 of 113 in total

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