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NECEvent2014_4_1_scaffold_31

Alias: 174_001_scaffold_31

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_31_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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494..3133
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CXH5_CLOPF rbh
NECEvent2014_4_1_scaffold_31_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3277..3534
DNA (258bp) protein (86aa)
UPF0297 protein CPR_1749 n=10 Tax=Clostridium perfringens RepID=Y1749_CLOPS
UPF0297 protein AC3_2258 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
hypothetical protein
NECEvent2014_4_1_scaffold_31_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3582..3995
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=451755 specie
Putative Holliday junction resolvase n=10 Tax=Clostridium perfringens RepID=RUVX_CLOP1
Holliday junction resolvase-like protein
NECEvent2014_4_1_scaffold_31_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4011..4265
DNA (255bp) protein (85aa)
UPF0473 protein CPR_1747 n=9 Tax=Clostridium perfringens RepID=Y1747_CLOPS
UPF0473 protein HA1_10696 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
hypothetical protein
NECEvent2014_4_1_scaffold_31_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4286..4738
DNA (453bp) protein (151aa)
FUR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CXH1_CLOPF rbh
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT13506.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
FUR family transcriptional regulator
NECEvent2014_4_1_scaffold_31_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4731..6476
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJI1_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81481.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_31_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6633..8465
DNA (1833bp) protein (611aa)
GTP-binding protein TypA n=1 Tax=Clostridium perfringens F262 RepID=H7CXG9_CLOPF rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EIA16624.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
typA; GTP-binding protein TypA
NECEvent2014_4_1_scaffold_31_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8572..9636
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BJ85_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16623.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_31_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9652..10296
DNA (645bp) protein (215aa)
O-methyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CXG7_CLOPF rbh
O-methyltransferase family protein {ECO:0000313|EMBL:EDT13504.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
O-methyltransferase
NECEvent2014_4_1_scaffold_31_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10302..11531
DNA (1230bp) protein (410aa)
U32 family peptidase n=8 Tax=Clostridium perfringens RepID=H7CXG6_CLOPF rbh
Peptidase, U32 family {ECO:0000313|EMBL:EDT13517.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
U32 family peptidase
NECEvent2014_4_1_scaffold_31_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11531..12157
DNA (627bp) protein (209aa)
Uridine kinase {ECO:0000255|HAMAP-Rule:MF_00551}; EC=2.7.1.48 {ECO:0000255|HAMAP-Rule:MF_00551};; Cytidine monophosphokinase {ECO:0000255|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000255|H
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=9 Tax=Clostridium perfringens RepID=URK_CLOP1 rbh
NECEvent2014_4_1_scaffold_31_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12270..13937
DNA (1668bp) protein (556aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens F262 RepID=H7CXG4_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EIA16619.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
spoVD; stage V sporulation protein D
NECEvent2014_4_1_scaffold_31_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14000..14701
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXG3_CLOPF rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
sigK; sporulation sigma factor SigK
NECEvent2014_4_1_scaffold_31_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14882..15934
DNA (1053bp) protein (351aa)
Twitching motility protein PilT n=8 Tax=Clostridium perfringens RepID=H7CXG2_CLOPF rbh
Twitching motility protein PilT {ECO:0000313|EMBL:EDT26462.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
pilT; twitching motility protein PilT
NECEvent2014_4_1_scaffold_31_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16012..17250
DNA (1239bp) protein (413aa)
Cell division protein FtsA n=1 Tax=Clostridium perfringens F262 RepID=H7CXG1_CLOPF rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
ftsA; cell division protein FtsA
NECEvent2014_4_1_scaffold_31_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17264..18409
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=7 Tax=Clostridium perfringens RepID=H7CXG0_CLOPF rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
ftsZ; cell division protein FtsZ
NECEvent2014_4_1_scaffold_31_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18814..19620
DNA (807bp) protein (269aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; St
Sporulation factor SpoIIGA n=6 Tax=Clostridium perfringens RepID=H7CXF8_CLOPF rbh
spoIIGA; sporulation factor SpoIIGA
NECEvent2014_4_1_scaffold_31_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19634..20341
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXF7_CLOPF rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str
sigE; sporulation sigma factor SigE
NECEvent2014_4_1_scaffold_31_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20377..21189
DNA (813bp) protein (271aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
sigG; sporulation sigma factor SigG
NECEvent2014_4_1_scaffold_31_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21330..21602
DNA (273bp) protein (91aa)
PRC-barrel domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXF5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB81466.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
PRC-barrel domain-containing protein
NECEvent2014_4_1_scaffold_31_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21664..22113
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=9 Tax=Clostridium perfringens RepID=NRDR_CLOP1
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
nrdR; transcriptional regulator NrdR
NECEvent2014_4_1_scaffold_31_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22279..22983
DNA (705bp) protein (235aa)
Multicopper polyphenol oxidase n=2 Tax=Clostridium perfringens RepID=H7CXF3_CLOPF rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_31_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22997..24712
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensory box histidine kinase n=5 Tax=Clostridium perfringens RepID=H7CXF2_CLOPF rbh
sensory box histidine kinase
NECEvent2014_4_1_scaffold_31_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25039..26376
DNA (1338bp) protein (446aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CXF1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT71359.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_4_1_scaffold_31_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26379..27695
DNA (1317bp) protein (439aa)
GTPase Der n=11 Tax=Clostridium perfringens RepID=DER_CLOP1 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostri
engA; GTP-binding protein EngA
NECEvent2014_4_1_scaffold_31_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27700..28695
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=8 Tax=Clostridium perfringens RepID=GPDA_CLOP1 rbh
NECEvent2014_4_1_scaffold_31_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29024..30499
DNA (1476bp) protein (492aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=883064 species="Ba
Stage IV sporulation protein A n=9 Tax=Clostridium perfringens RepID=H7CXE8_CLOPF rbh
spoIVA; stage IV sporulation protein A
NECEvent2014_4_1_scaffold_31_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30850..31833
DNA (984bp) protein (328aa)
L-asparaginase {ECO:0000313|EMBL:EDT14044.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EDT14044.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
L-asparaginase (EC:3.5.1.1)
L-asparaginase n=9 Tax=Clostridium perfringens RepID=Q0TPK2_CLOP1 rbh
NECEvent2014_4_1_scaffold_31_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32091..33488
DNA (1398bp) protein (466aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXE6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16601.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_31_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33709..34593
DNA (885bp) protein (295aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CXE5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14034.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
Displaying items 1-30 of 113 in total

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