ggKbase home page

NECEvent2014_4_1_scaffold_31_19

Organism: NECEvent2014_4_1_Clostridium_perfringens_28_318

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 20377..21189

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 3.10e-146
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 4.30e-146
sigG; sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 8.70e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 813
ATGCGGAAGGGAATTACTTCGAAGGGGTTGATTTCAATTATGATGATAAATAAAGTAGAAATATGTGGAGTCAATACAGCTAAATTACCAGTTTTAAAAGAAAAAGAAATGAAAGAATTATTGCTACAAATGCAAAATGGAGATACAAGTGCTAGAGAGAAATTTATTAAGGGGAATCTGAGATTAGTGCTTAGTGTAATCCAAAGGTTTAATAATAGAGGCGAAAATGTAGATGATTTATTTCAAGTTGGTTGTATAGGACTTATGAAATCTATAGATAACTTTGATTTATCACAAAATGTTAAATTTTCAACTTATGCTGTGCCAATGATAATAGGAGAAATAAGAAGATATTTAAGGGATAATAACACTATAAGAGTAAGTAGATCTTTAAGAGATATAGCTTATAAGGCTTTACTTGTAAGAGATAAGCTAGTAAATGAAAATAATAAGGAACCTACTGTATCTCAAATAGCAAAAGAGCTTAAAATTCCAAGGGAAGATGTTGTTTTTGCCCTAGATGCAATTCAAGATCCAGTTTCTTTATTTGAGCCTATTTATCATGATGGTGGAGATGCAATATATGTAATGGATCAGATAAGTGATTCAAAAAATCAAGATGATAGTTGGCTTGAAAATATAGCAATAAAGGAAGCTATGAAGAAATTAAACGATAGAGAAAAACTTATATTGAATTTAAGATTCTTTAATGGAAGAACTCAAATGGAGGTAGCTGATGAAATTGGTATATCTCAAGCACAAGTTTCAAGGTTGGAAAAAATAGCATTAAAGCATATGAGGAAGTATGTATAG
PROTEIN sequence
Length: 271
MRKGITSKGLISIMMINKVEICGVNTAKLPVLKEKEMKELLLQMQNGDTSAREKFIKGNLRLVLSVIQRFNNRGENVDDLFQVGCIGLMKSIDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNTIRVSRSLRDIAYKALLVRDKLVNENNKEPTVSQIAKELKIPREDVVFALDAIQDPVSLFEPIYHDGGDAIYVMDQISDSKNQDDSWLENIAIKEAMKKLNDREKLILNLRFFNGRTQMEVADEIGISQAQVSRLEKIALKHMRKYV*