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NECEvent2014_4_1_scaffold_269

Alias: 174_001_scaffold_269

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_269_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1167)
DNA (1167bp) protein (389aa)
Probable enterotoxin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMT2_CLOPE rbh
Probable enterotoxin {ECO:0000313|EMBL:BAB80312.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
entD; enterotoxin
NECEvent2014_4_1_scaffold_269_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1410..2591
DNA (1182bp) protein (394aa)
Cation efflux family protein n=2 Tax=Clostridium perfringens RepID=B1BEZ7_CLOPF rbh
Cation efflux family protein {ECO:0000313|EMBL:EDS81609.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
cation efflux family protein rbh
NECEvent2014_4_1_scaffold_269_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2694..4577)
DNA (1884bp) protein (628aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK2_CLOP1 rbh
Sulfatase domain protein {ECO:0000313|EMBL:EDT14533.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
sulfatase
NECEvent2014_4_1_scaffold_269_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4623..5666)
DNA (1044bp) protein (348aa)
ISCpe4, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUX8_CLOPS rbh
ISCpe4, transposase {ECO:0000313|EMBL:ABG87089.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
ISCpe4, transposase
NECEvent2014_4_1_scaffold_269_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5751..5990)
DNA (240bp) protein (80aa)
Resolvase, N terminal domain family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUE2_CLOPS
Resolvase, N terminal domain family {ECO:0000313|EMBL:ABG87183.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
resolvase domain-containing protein
NECEvent2014_4_1_scaffold_269_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6311..8119)
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1 rbh
Sulfatase family protein {ECO:0000313|EMBL:EDT22532.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
sulfatase
NECEvent2014_4_1_scaffold_269_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8337..9059)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN90_CLOPF rbh
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT25950.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
amino acid ABC transporter ATP-binding protein
NECEvent2014_4_1_scaffold_269_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9053..9727)
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF rbh
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
His/Glu/Gln/Arg/opine ABC transporter permease
NECEvent2014_4_1_scaffold_269_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9758..10594)
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST2_CLOPF rbh
Amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:ABG85477.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
amino acid ABC transporter
NECEvent2014_4_1_scaffold_269_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11050..13170)
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Putative helicase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST1_CLOPF rbh
helicase
NECEvent2014_4_1_scaffold_269_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13386..15539)
DNA (2154bp) protein (718aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST0_CLOPF rbh
ftsH; ATP-dependent metalloprotease FtsH
NECEvent2014_4_1_scaffold_269_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15564..16094)
DNA (531bp) protein (177aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF rbh
NECEvent2014_4_1_scaffold_269_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16097..16315)
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMU2_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:EIA17837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_269_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16772..18067)
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=5 Tax=Clostridium perfringens RepID=Q0TTL1_CLOP1 rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
NECEvent2014_4_1_scaffold_269_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18478..19017)
DNA (540bp) protein (180aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium perfringens RepID=B1BEX9_CLOPF rbh
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS81636.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NUDIX family hydrolase
NECEvent2014_4_1_scaffold_269_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19431..20123)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSS5_CLOPF rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
sfsA; sugar fermentation stimulation protein A
NECEvent2014_4_1_scaffold_269_trna_1
unknown

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comp(20551..20622)
DNA (72bp)
transferRNA
Displaying 17 items

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