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NECEvent2014_4_1_scaffold_278

Alias: 174_001_scaffold_278

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_278_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..100
DNA (99bp) protein (33aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=14 Tax=Clostridium perfringens RepID=EFTU_CLOP1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_4_1_scaffold_278_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

486..710
DNA (225bp) protein (75aa)
Protein translocase subunit SecE n=4 Tax=Clostridium perfringens RepID=H7CZC5_CLOPF
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
secE; preprotein translocase subunit SecE
NECEvent2014_4_1_scaffold_278_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

748..1269
DNA (522bp) protein (174aa)
Transcription termination/antitermination protein NusG n=6 Tax=Clostridium perfringens RepID=H7CZC4_CLOPF rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
nusG; transcription antitermination protein NusG
NECEvent2014_4_1_scaffold_278_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1344..1769
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=6 Tax=Clostridium perfringens RepID=RL11_CLOP1
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
rplK; 50S ribosomal protein L11
NECEvent2014_4_1_scaffold_278_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1827..2516
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=6 Tax=Clostridium perfringens RepID=RL1_CLOP1 rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
rplA; 50S ribosomal protein L1
NECEvent2014_4_1_scaffold_278_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2733..3233
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=5 Tax=Clostridium perfringens RepID=H7CZC1_CLOPF rbh
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
rplJ; 50S ribosomal protein L10
NECEvent2014_4_1_scaffold_278_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3288..3653
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=8 Tax=Clostridium perfringens RepID=RL7_CLOP1
Ribosomal protein L {ECO:0000313|EMBL:ABA64416.1}; Flags: Fragment;; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
rplL; 50S ribosomal protein L7/L12
NECEvent2014_4_1_scaffold_278_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3958..7662
DNA (3705bp) protein (1235aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium perfringens RepID=RPOB_CLOP1 rbh
NECEvent2014_4_1_scaffold_278_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7742..11278
DNA (3537bp) protein (1179aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=10 Tax=Clostridium perfringens RepID=RPOC_CLOP1 rbh
NECEvent2014_4_1_scaffold_278_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11391..11630
DNA (240bp) protein (80aa)
Ribosomal protein L7AE family n=11 Tax=Clostridium perfringens RepID=Q8XHR8_CLOPE
Ribosomal protein L7AE family protein {ECO:0000313|EMBL:EIA15975.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
ribosomal protein L7AE family protein
NECEvent2014_4_1_scaffold_278_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11688..12068
DNA (381bp) protein (127aa)
30S ribosomal protein S12 n=10 Tax=Clostridium perfringens RepID=RS12_CLOP1
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
rpsL; 30S ribosomal protein S12
NECEvent2014_4_1_scaffold_278_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12228..12698
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=10 Tax=Clostridium perfringens RepID=RS7_CLOP1 rbh
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
rpsG; 30S ribosomal protein S7
NECEvent2014_4_1_scaffold_278_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12779..14845
DNA (2067bp) protein (689aa)
Elongation factor G n=8 Tax=Clostridium perfringens RepID=EFG_CLOPE rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
fusA; elongation factor G
NECEvent2014_4_1_scaffold_278_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14918..14998
DNA (81bp) protein (27aa)
DNA gyrase, B subunit {ECO:0000313|EMBL:EDT70008.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EDT70008.1};; Flags: Fragment;; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=14 Tax=Clostridium perfringens RepID=EFTU_CLOP1
Displaying 14 items

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