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NECEvent2014_4_1_scaffold_118_17

Organism: NECEvent2014_4_1_Clostridium_perfringens_28_318

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(18145..18732)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridium perfringens RepID=H1CUN4_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 349
  • Evalue 2.20e-93
  • rbh
Probable RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80065.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 349
  • Evalue 3.10e-93
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 349
  • Evalue 6.10e-94

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
ATGGAACAATTCTGTATAATTTACTCTCTAATAGTTGAAAAAGGAGGGATGATGTTGGAACTAATAAGCTTTTTTAATAAAAATTCATTTAATAAAGTTTCGTATAAAAAATTAACCAAAGAGAGATTGTCTCAAAACTTTGAACTATTAATAAAAGAAAATCTCACTTCTATGTATAGGGTAGCTAAAGGAATTTTAAAAGTTGAAGAAGATATTGAAGATGCTATTCAAACTACTATTTTAATAGCCTTTAATAAAATTAATACTCTAAAGGATGAAAGGTATTTTAAAACATGGTTAATAAGAATTTTAATAAATGAGTGTAATAAAATCTATAAGAAAAATAAAAACACTCCAAAGGAGTTAAGTTCTGAATTATATATAACTGAAAACTATGAAAATATAGATTTATATGATGCAATCAAATGTTTAAAAGAAGATTTAAGAGTAATAACAATACTTTTCTACTTCGAGGACATGTCTTATAAAGATATTGCAGTGGCACTAAATATAGCTGAAGGAACTGTAAAATCTAGACTTTTTAGAGCTAAAGAAGCTTTATATGAAATTCTTAAAGATAATATTTAA
PROTEIN sequence
Length: 196
MEQFCIIYSLIVEKGGMMLELISFFNKNSFNKVSYKKLTKERLSQNFELLIKENLTSMYRVAKGILKVEEDIEDAIQTTILIAFNKINTLKDERYFKTWLIRILINECNKIYKKNKNTPKELSSELYITENYENIDLYDAIKCLKEDLRVITILFYFEDMSYKDIAVALNIAEGTVKSRLFRAKEALYEILKDNI*