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NECEvent2014_4_1_scaffold_118

Alias: 174_001_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_118_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55..465
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TU98_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:EDT23681.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_1_scaffold_118_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

480..884
DNA (405bp) protein (135aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1R7V2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23669.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_1_scaffold_118_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

874..1158
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TU96_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:EDT72663.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_4_1_scaffold_118_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1167..1538
DNA (372bp) protein (124aa)
Putative membrane protein n=3 Tax=Clostridium perfringens RepID=Q0TU95_CLOP1
Putative membrane protein {ECO:0000313|EMBL:EDT23689.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
hypothetical protein
NECEvent2014_4_1_scaffold_118_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1613..2284)
DNA (672bp) protein (224aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0G5_CLOPF rbh
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDT72682.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
cyclic nucleotide-binding domain-containing protein
NECEvent2014_4_1_scaffold_118_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3230..6049
DNA (2820bp) protein (940aa)
UvrABC system protein A n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0G4_CLOPF rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A
NECEvent2014_4_1_scaffold_118_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6383..6817
DNA (435bp) protein (145aa)
FHA domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CSD2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80055.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
FHA domain-containing protein
NECEvent2014_4_1_scaffold_118_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6831..8060
DNA (1230bp) protein (410aa)
Cell cycle protein FtsW n=6 Tax=Clostridium perfringens RepID=H7CSD3_CLOPF rbh
Probable cell division protein {ECO:0000313|EMBL:BAB80056.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
cell cycle protein FtsW
NECEvent2014_4_1_scaffold_118_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8061..9524
DNA (1464bp) protein (488aa)
Probable penicillin-binding protein n=6 Tax=Clostridium perfringens RepID=Q8XNI2_CLOPE rbh
Putative penicillin-binding protein {ECO:0000313|EMBL:EDS79866.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
penicillin-binding protein
NECEvent2014_4_1_scaffold_118_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9678..11543
DNA (1866bp) protein (622aa)
UvrABC system protein C n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJY2_CLOPF rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
NECEvent2014_4_1_scaffold_118_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11692..12606
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=7 Tax=Clostridium perfringens RepID=MURB_CLOP1 rbh
NECEvent2014_4_1_scaffold_118_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12845..13729
DNA (885bp) protein (295aa)
UPF0042 nucleotide-binding protein CPR_0335 n=9 Tax=Clostridium perfringens RepID=Y335_CLOPS rbh
Nucleotide-binding protein CPR_0335 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
hypothetical protein
NECEvent2014_4_1_scaffold_118_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13726..15072
DNA (1347bp) protein (449aa)
Putative gluconeogenesis factor n=2 Tax=Clostridium perfringens RepID=H7CSD8_CLOPF rbh
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
hypothetical protein
NECEvent2014_4_1_scaffold_118_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15075..16025
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=9 Tax=Clostridium perfringens RepID=WHIA_CLOP1 rbh
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
hypothetical protein
NECEvent2014_4_1_scaffold_118_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16199..16753
DNA (555bp) protein (185aa)
Putative lioprotein n=4 Tax=Clostridium perfringens RepID=H7CSE0_CLOPF rbh
Putative lioprotein {ECO:0000313|EMBL:EIA18462.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lioprotein
NECEvent2014_4_1_scaffold_118_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16887..18170)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDR4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT27914.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_1_scaffold_118_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18145..18732)
DNA (588bp) protein (196aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridium perfringens RepID=H1CUN4_CLOPF rbh
Probable RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80065.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
RNA polymerase ECF-type sigma factor
NECEvent2014_4_1_scaffold_118_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19150..20400
DNA (1251bp) protein (417aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
DNA polymerase III, alpha subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJX4_CLOPF rbh
DNA polymerase III, subunit alpha (dnaE)-like protein
NECEvent2014_4_1_scaffold_118_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20605..21384
DNA (780bp) protein (260aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=Q0TU84_CLOP1 rbh
Conserved domain protein {ECO:0000313|EMBL:EDT28003.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
hypothetical protein
NECEvent2014_4_1_scaffold_118_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21497..23821
DNA (2325bp) protein (775aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III subunit alpha n=2 Tax=Clostridium perfringens RepID=B1R4D0_CLOPF rbh
NECEvent2014_4_1_scaffold_118_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24539..25498
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase 1 n=10 Tax=Clostridium perfringens PF1_CLOPE">RepID=K6PF1_CLOPE rbh
NECEvent2014_4_1_scaffold_118_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25592..26995
DNA (1404bp) protein (468aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Pyruvate kinase n=6 Tax=Clostridium perfringens RepID=H7CSE3_CLOPF rbh
pykA; pyruvate kinase
NECEvent2014_4_1_scaffold_118_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27576..27932
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CSE4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80069.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_118_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28241..29038
DNA (798bp) protein (266aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4C6_CLOPF rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT25059.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
dehydrogenase
NECEvent2014_4_1_scaffold_118_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29213..30748
DNA (1536bp) protein (512aa)
Cardiolipin synthetase n=3 Tax=Clostridium perfringens RepID=H7CSE6_CLOPF rbh
Cardiolipin synthetase {ECO:0000313|EMBL:EIA18468.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
clsB; cardiolipin synthetase
NECEvent2014_4_1_scaffold_118_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30950..31108)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CSE7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18469.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_118_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31375..32937
DNA (1563bp) protein (521aa)
GntR family transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CSE8_CLOPF rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA18470.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
GntR family transcriptional regulator
NECEvent2014_4_1_scaffold_118_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33239..34606
DNA (1368bp) protein (456aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens F262 RepID=H7CSE9_CLOPF rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EIA18471.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_1_scaffold_118_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35418..36275)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium perfringens RepID=B1BNT9_CLOPF rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT16677.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
transcriptional regulator
NECEvent2014_4_1_scaffold_118_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36464..37732
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNG2_CLOPE rbh
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EDT24979.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
Displaying items 1-30 of 37 in total

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