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NECEvent2014_4_1_scaffold_118_28

Organism: NECEvent2014_4_1_Clostridium_perfringens_28_318

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 33239..34606

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 455.0
  • Bit_score: 912
  • Evalue 4.20e-263
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens F262 RepID=H7CSE9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 455.0
  • Bit_score: 912
  • Evalue 1.50e-262
  • rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EIA18471.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 455.0
  • Bit_score: 912
  • Evalue 2.10e-262

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1368
ATGGTTGAAAAGAATAAAGAATATATTTTTGATATAATCTCTCAAGGATATGAGGGTGAAGGAATAGCTAAAATTGATAATAAATACCCAATTTTCATTGAGGGAGCTTTAAAGGGCGAAAAGGTTAAAGTAAGAATAGTTAAGGTTAATAAAAATTTTGCCTATGGAAAACTTATGGAAGTATTAGAAGCTTCAGAGCAAAGAGTTAATCCACCTTGTGCTATTTATAAAAGATGTGGGGGATGTAAGCTTCAGCACGCTTCTTACAAGGCACAATTAGATTTTAAATGGGATAGAGTTAAGGATTGTGTTAGTAAGATTGGAAAGTTAGATCCTAGCATAGTTAAATATCCCTTAGGAATGGAAGAGCCTTGGAGATATAGAAATAAGGTTCAATTACCAATAGGGCTAATTAATGGAGAGGTTAAAATAGGATTCTTTGCTCCAAGAAGTCATGACATTATCGACATGGAATCTTGCTTAATTCAAGATGAAATAGGAGATAAGGTTGTTAAACTTACTAGAGAATGGATAGAGAAATTTAATATAAGACCATATAATGTAGATGGTGAGTATGATGAAAAGGGAGTAGTAAGACACATAATGATAAGAAGAGGTTTTACAACTAATGAGGTTATGGTTGTCTTAGTTACAAATGGAGAAAAACTTCCTCATAAAGAAGAGTTTGTAGACTTAATGGTTAAAAATATTCCTGGAATAAAGAGTGTTATACAAAATATAAACTCAAAGAAAACTAATGTAATATTAGGCTTAGAAAGTAAAACTCTATGGGGAGAAGATACAATATCAGATTACATAGGAGACTTTAGATTCAACATATCTCCATTATCATTCTTCCAAGTAAATCCTACTCAAACAGAGGTTTTATATGGTAAGGCTTTAGAATATGCAAATCTTACAGGAAATGAAGAAGTATTTGATGCATATTGTGGAACAGGAACAATAACATTATTCCTATCACAAAAGGCTAAAAAAGTTTATGGAGTAGAAATAATTCCACAGGCCATAGATAATGCTTGGATAAATGCAAAGGAAAATAAAGTAGAGAATGTGGAATTCTTCGTTGGAGAATCAGAAGTGGTGATTCCAGACTTAATAAATAAGGGAGTAAAAGCTGATGTGGTAGTAGTAGACCCACCAAGAAAAGGATGCGATAAAAAATTACTAGATGCCATAACAAATATAGATGCTAAAAAAATAGTATATGTAAGCTGTGATCCAAGTACTTTAGGAAGAGACTTAAAAGTATTAGAAGATAATGGCTATAAAACTTTAGAAGTTCAACCAGTGGATATGTTTCCTAATACATCTCACGTAGAAAATGTAGCTAAGTTAATAAAAAAATAA
PROTEIN sequence
Length: 456
MVEKNKEYIFDIISQGYEGEGIAKIDNKYPIFIEGALKGEKVKVRIVKVNKNFAYGKLMEVLEASEQRVNPPCAIYKRCGGCKLQHASYKAQLDFKWDRVKDCVSKIGKLDPSIVKYPLGMEEPWRYRNKVQLPIGLINGEVKIGFFAPRSHDIIDMESCLIQDEIGDKVVKLTREWIEKFNIRPYNVDGEYDEKGVVRHIMIRRGFTTNEVMVVLVTNGEKLPHKEEFVDLMVKNIPGIKSVIQNINSKKTNVILGLESKTLWGEDTISDYIGDFRFNISPLSFFQVNPTQTEVLYGKALEYANLTGNEEVFDAYCGTGTITLFLSQKAKKVYGVEIIPQAIDNAWINAKENKVENVEFFVGESEVVIPDLINKGVKADVVVVDPPRKGCDKKLLDAITNIDAKKIVYVSCDPSTLGRDLKVLEDNGYKTLEVQPVDMFPNTSHVENVAKLIKK*