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NECEvent2014_4_1_scaffold_5

Alias: 174_001_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_5_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..181
DNA (180bp) protein (60aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
aat; Leucyl/phenylalanyl-tRNA-protein transferase (EC:2.3.2.6)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH1_CLOBU
NECEvent2014_4_1_scaffold_5_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

314..1654
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AG56_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88280.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_5_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1994..3289
DNA (1296bp) protein (432aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI7_CLOBU rbh
NECEvent2014_4_1_scaffold_5_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3442..3738
DNA (297bp) protein (99aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KJZ95167.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KJZ95167.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QSK0_CLOBU
hypothetical protein
NECEvent2014_4_1_scaffold_5_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3918..4451
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6N5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
5-nitroimidazole antibiotic resistance protein
NECEvent2014_4_1_scaffold_5_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4507..5049
DNA (543bp) protein (181aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLG9_CLOBU rbh
Ribosomal-protein-S5p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ88326.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_4_1_scaffold_5_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5303..7621)
DNA (2319bp) protein (773aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Alpha-amylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB34_CLOBU rbh
amyA; alpha-amylase
NECEvent2014_4_1_scaffold_5_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8076..10745
DNA (2670bp) protein (890aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88266.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88266.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
mgtA1; Magnesium-transporting ATPase, P-type 1;Tn916-like, CTn7-Orf12 (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI1_CLOBU rbh
NECEvent2014_4_1_scaffold_5_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10762..11265
DNA (504bp) protein (168aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K6S4_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ35351.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
winged helix family two component response transcriptional regulator
NECEvent2014_4_1_scaffold_5_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11452..14184
DNA (2733bp) protein (911aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88268.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88268.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Magnesium-importing ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK74_CLOBU rbh
magnesium-translocating P-type ATPase
NECEvent2014_4_1_scaffold_5_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14252..14719
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARG1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88308.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_5_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14806..16422)
DNA (1617bp) protein (539aa)
Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Clostridium butyricum DKU-01 RepID=M8JB40_CLOBU rbh
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KJZ88249.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
diguanylate cyclase/phosphodiesterase
NECEvent2014_4_1_scaffold_5_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16852..18015
DNA (1164bp) protein (388aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF23_CLOBU rbh
Methyltransferase {ECO:0000313|EMBL:EEP54373.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL52
methyltransferase TRM13 family protein
NECEvent2014_4_1_scaffold_5_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18126..19040
DNA (915bp) protein (305aa)
Chemotaxis protein CheV n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6S9_CLOBU rbh
Chemotaxis protein CheV {ECO:0000313|EMBL:EEP53602.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
cheV; chemotaxis protein CheV
NECEvent2014_4_1_scaffold_5_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19124..19555)
DNA (432bp) protein (144aa)
Transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QYB4_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ88253.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
MarR family transcriptional regulator
NECEvent2014_4_1_scaffold_5_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20063..21217
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARF5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35344.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative secretion protein HlyD family protein
NECEvent2014_4_1_scaffold_5_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21229..22587
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG45_CLOBU rbh
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:KJZ88285.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
hypothetical protein
NECEvent2014_4_1_scaffold_5_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22584..23813
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ATH3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35342.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ABC-2 type transporter
NECEvent2014_4_1_scaffold_5_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24040..25452
DNA (1413bp) protein (471aa)
ytjP; putative dipeptidase YtjP (EC:3.4.13.-)
Dipeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6T3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_5_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25947..27170
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6M1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35340.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
choline-binding protein Cbp5
NECEvent2014_4_1_scaffold_5_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27685..30300
DNA (2616bp) protein (872aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARF0_CLOBU rbh
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ35339.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ATPase P
NECEvent2014_4_1_scaffold_5_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30585..31760)
DNA (1176bp) protein (392aa)
dapL; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG40_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35338.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_5_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31900..32040
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QYA6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI90458.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_1_scaffold_5_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32025..33716
DNA (1692bp) protein (564aa)
Repressor LexA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATG8_CLOBU rbh
Repressor LexA {ECO:0000313|EMBL:ENZ35337.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LexA repressor
NECEvent2014_4_1_scaffold_5_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33839..34024
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z643_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35336.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_5_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34061..34381
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6M0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35335.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_5_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34554..35528
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARE3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35334.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_5_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35548..35949
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJN3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35333.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_5_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35979..37013
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATG3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35332.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
prophage ps3 protein 01, putative
NECEvent2014_4_1_scaffold_5_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37083..37850
DNA (768bp) protein (256aa)
putative PHP domain (EC:3.1.3.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z639_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88332.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying items 1-30 of 207 in total

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