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NECEvent2014_4_1_scaffold_12

Alias: 174_001_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_12_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105..1367)
DNA (1263bp) protein (421aa)
Uracil-xanthine permease n=2 Tax=Clostridium butyricum RepID=R0A3B3_CLOBU rbh
Uracil-xanthine permease {ECO:0000313|EMBL:ENZ30998.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uracil permease
NECEvent2014_4_1_scaffold_12_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1646..2374
DNA (729bp) protein (243aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ87533.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ87533.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Polysaccharide deacetylase n=2 Tax=Clostridium butyricum RepID=M8KAY5_CLOBU rbh
polysaccharide deacetylase
NECEvent2014_4_1_scaffold_12_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..2995)
DNA (546bp) protein (182aa)
Tryptophan transport protein n=3 Tax=Clostridium butyricum RepID=C4IDV6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31000.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_12_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3497..4828)
DNA (1332bp) protein (444aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS1_CLOBU rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ31001.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
diguanylate cyclase (GGDEF) domain-containing protein
NECEvent2014_4_1_scaffold_12_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4856..4951)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31002.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_12_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4986..5174)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXF9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31003.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF4250
NECEvent2014_4_1_scaffold_12_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5372..6238)
DNA (867bp) protein (289aa)
PP-loop family protein n=4 Tax=Clostridium butyricum RepID=B1QXG0_CLOBU rbh
tRNA(Cytosine32)-2-thiocytidine synthetase {ECO:0000313|EMBL:KJZ87464.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
NECEvent2014_4_1_scaffold_12_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6513..6737
DNA (225bp) protein (75aa)
PspC domain protein n=4 Tax=Clostridium butyricum RepID=B1QXG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87537.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phage-shock protein
NECEvent2014_4_1_scaffold_12_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6816..7415
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31006.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_12_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7707..7895
DNA (189bp) protein (63aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QXG3_CLOBU
Small acid-soluble spore protein, beta-type SASP {ECO:0000313|EMBL:KJZ87539.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
hypothetical protein
NECEvent2014_4_1_scaffold_12_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7956..8675)
DNA (720bp) protein (240aa)
Two-component system KDP operon response regulator KdpE n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3C0_CLOBU rbh
Two-component system KDP operon response regulator KdpE {ECO:0000313|EMBL:ENZ31008.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
KDP operon transcriptional regulatory protein KdpE
NECEvent2014_4_1_scaffold_12_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8668..11358)
DNA (2691bp) protein (897aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
sensor protein KdpD (EC:2.7.13.3)
Sensor protein KdpD n=3 Tax=Clostridium butyricum RepID=B1QXG5_CLOBU rbh
NECEvent2014_4_1_scaffold_12_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11463..12338)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU78_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31010.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_12_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12360..12965)
DNA (606bp) protein (202aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTT3_CLOBU rbh
NECEvent2014_4_1_scaffold_12_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12983..15049)
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFV5_CLOBU rbh
NECEvent2014_4_1_scaffold_12_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15066..16805)
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3C6_CLOBU rbh
NECEvent2014_4_1_scaffold_12_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17133..17522)
DNA (390bp) protein (130aa)
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase {ECO:0000313|EMBL:KJZ83310.1}; EC=2.7.1.121 {ECO:0000313|EMBL:KJZ83310.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridial
Dihydroxyacetone kinase, phosphotransfer subunit n=3 Tax=Clostridium butyricum RepID=B1QXH0_CLOBU
PTS system mannnose-specific transporter subunit IIA
NECEvent2014_4_1_scaffold_12_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17543..18169)
DNA (627bp) protein (209aa)
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EEP55505.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55505.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
putative kinase (EC:2.7.-.-)
Dihydroxyacetone kinase, L subunit n=3 Tax=Clostridium butyricum RepID=B1QXH1_CLOBU rbh
NECEvent2014_4_1_scaffold_12_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18207..19202)
DNA (996bp) protein (332aa)
dhaK; dihydroxyacetone kinase subunit DhaK (EC:2.7.1.-)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTT7_CLOBU rbh
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:ENZ31016.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_4_1_scaffold_12_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19404..22019)
DNA (2616bp) protein (872aa)
UPI0003D69A8A related cluster n=1 Tax=unknown RepID=UPI0003D69A8A rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
clpB2; chaperone protein ClpB
NECEvent2014_4_1_scaffold_12_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22334..23845
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31018.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
flotillin
NECEvent2014_4_1_scaffold_12_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23912..25174)
DNA (1263bp) protein (421aa)
Xre family DNA-binding domain and TPR-repeat-containing protein n=3 Tax=Clostridium butyricum RepID=B1QXH5_CLOBU rbh
TPR protein {ECO:0000313|EMBL:EEP55435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TPR repeat-containing protein
NECEvent2014_4_1_scaffold_12_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25191..26498)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU89_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31020.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative transcriptional regulator
NECEvent2014_4_1_scaffold_12_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26748..26921)
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31021.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_12_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27012..27974)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFW6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31022.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_12_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28014..28979)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXH9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55121.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_1_scaffold_12_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29187..30020)
DNA (834bp) protein (278aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QXI0_CLOBU rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YaeC family lipoprotein
NECEvent2014_4_1_scaffold_12_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30208..30846)
DNA (639bp) protein (213aa)
D-methionine transport system permease protein MetI n=3 Tax=Clostridium butyricum RepID=B1QXI1_CLOBU rbh
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EEP55663.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
metI; D-methionine transport system permease protein MetI
NECEvent2014_4_1_scaffold_12_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30846..31886)
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
metN; methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN n=3 Tax=Clostridium butyricum RepID=C4IDY2_CLOBU rbh
NECEvent2014_4_1_scaffold_12_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32229..32699)
DNA (471bp) protein (157aa)
SsrA-binding protein n=3 Tax=Clostridium butyricum RepID=C4IDY3_CLOBU rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
smpB; SsrA-binding protein SmpB
Displaying items 1-30 of 139 in total

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