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NECEvent2014_4_1_scaffold_76

Alias: 174_001_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_76_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68..1108)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KC50_CLOBU rbh
No significant putative N-terminal signal sequence was found by PSORT {ECO:0000313|EMBL:KJZ83050.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
hypothetical protein
NECEvent2014_4_1_scaffold_76_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1129..2175)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AHK6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83049.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
exopolysaccharide biosynthesis protein
NECEvent2014_4_1_scaffold_76_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2496..3464
DNA (969bp) protein (323aa)
birA; bifunctional protein BirA (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=3 Tax=Clostridium butyricum RepID=B1QTQ6_CLOBU rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
NECEvent2014_4_1_scaffold_76_4
unknown

Not on your lists

comp(3508..3660)
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_76_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..4057)
DNA (396bp) protein (132aa)
Thioesterase family protein n=4 Tax=Clostridium butyricum RepID=B1QTQ7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35846.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
thioesterase family protein
NECEvent2014_4_1_scaffold_76_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4254..5267)
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=4 Tax=Clostridium butyricum RepID=B1QTQ9_CLOBU rbh
NECEvent2014_4_1_scaffold_76_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5587..6540)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1523154 species="Bacteria; Firmicutes;
ldh1; L-lactate dehydrogenase Ldh (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASV8_CLOBU rbh
NECEvent2014_4_1_scaffold_76_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6775..7392
DNA (618bp) protein (206aa)
Exonuclease n=4 Tax=Clostridium butyricum RepID=B1QTR1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35843.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
exonuclease, RNase T and DNA polymerase III
NECEvent2014_4_1_scaffold_76_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7759..8469)
DNA (711bp) protein (237aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUZ6_CLOBU rbh
pyruvate formate-lyase activating enzyme
NECEvent2014_4_1_scaffold_76_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8683..10914)
DNA (2232bp) protein (744aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83131.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_1_scaffold_76_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11586..12260)
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU rbh
NECEvent2014_4_1_scaffold_76_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12294..13190)
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit (EC:1.3.1.14)
Dihydroorotate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QTR6_CLOBU rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_4_1_scaffold_76_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13210..13953)
DNA (744bp) protein (248aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=M8JIP9_CLOBU rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=15231
pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
NECEvent2014_4_1_scaffold_76_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14146..15018)
DNA (873bp) protein (291aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QTR8_CLOBU rbh
NECEvent2014_4_1_scaffold_76_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15060..16259)
DNA (1200bp) protein (400aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS0008
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase n=2 Tax=Clostridium butyricum RepID=M8KC59_CLOBU rbh
NECEvent2014_4_1_scaffold_76_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16410..16832)
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain n=4 Tax=Clostridium butyricum RepID=B1QTS0_CLOBU
Aspartate carbamoyltransferase regulatory chain (PyrI) {ECO:0000313|EMBL:KJZ83185.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
aspartate carbamoyltransferase regulatory subunit
NECEvent2014_4_1_scaffold_76_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16833..17759)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1523154 species="Ba
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH98_CLOBU rbh
NECEvent2014_4_1_scaffold_76_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18134..18913)
DNA (780bp) protein (260aa)
Beta-lactamase n=5 Tax=Clostridium butyricum RepID=B1QTS2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83141.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
beta-lactamase, putative
NECEvent2014_4_1_scaffold_76_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19006..20181)
DNA (1176bp) protein (392aa)
pfkA1; 6-phosphofructokinase 2 (EC:2.7.1.11)
UPI0003D647F4 related cluster n=1 Tax=unknown RepID=UPI0003D647F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83138.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_1_scaffold_76_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20516..21379)
DNA (864bp) protein (288aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KC64_CLOBU rbh
undecaprenyl pyrophosphate phosphatase
NECEvent2014_4_1_scaffold_76_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21470..22612)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTS5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53829.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_1_scaffold_76_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22744..24477)
DNA (1734bp) protein (578aa)
TPR repeat protein n=2 Tax=Clostridium butyricum RepID=M8JHA2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35829.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
tetratricopeptide TPR_2 repeat protein
NECEvent2014_4_1_scaffold_76_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24732..25829)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=2 Tax=Clostridium butyricum RepID=M8JIQ7_CLOBU rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
ychF; GTP-dependent nucleic acid-binding protein EngD
NECEvent2014_4_1_scaffold_76_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26060..26950
DNA (891bp) protein (297aa)
30.6 kDa protein in fumA 3'region (EC:3.5.1.-)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUY3_CLOBU rbh
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:ENZ35827.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyri
NECEvent2014_4_1_scaffold_76_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27001..27504)
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTS9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35826.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_76_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27671..27811
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8K3Z8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83120.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_76_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27872..28516)
DNA (645bp) protein (215aa)
Para-aminobenzoate synthase, aminase component {ECO:0000313|EMBL:KJZ97030.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KJZ97030.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHA7_CLOBU rbh
formiminotransferase-cyclodeaminase
NECEvent2014_4_1_scaffold_76_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28550..29776)
DNA (1227bp) protein (409aa)
O-antigen polymerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIR3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83164.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
O-antigen polymerase
NECEvent2014_4_1_scaffold_76_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29766..30923)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUX8_CLOBU rbh
Putative teichuronic acid biosynthesis glycosyl transferase TuaC {ECO:0000313|EMBL:KJZ83166.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
group 1 glycosyl transferase
NECEvent2014_4_1_scaffold_76_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30928..32226)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTT3_CLOBU rbh
TPR/glycosyl transferase domain protein {ECO:0000313|EMBL:KJZ88851.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
glycosyl transferases group 1
Displaying items 1-30 of 62 in total

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