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NECEvent2014_4_1_scaffold_130

Alias: 174_001_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_130_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(152..1912)
DNA (1761bp) protein (587aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE0_CLOBU rbh
NECEvent2014_4_1_scaffold_130_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2362..2757
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHD2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85119.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_130_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2759..3094
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6W6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35450.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_130_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3175..4602
DNA (1428bp) protein (476aa)
bglA1; 6-phospho-beta-glucosidase BglA (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6E7_CLOBU rbh
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:ENZ35451.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3
NECEvent2014_4_1_scaffold_130_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4899..5636
DNA (738bp) protein (246aa)
UPI00039A6198 related cluster n=1 Tax=unknown RepID=UPI00039A6198 rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ETI90802.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
transcriptional regulator, RpiR family
NECEvent2014_4_1_scaffold_130_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5995..6567
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWT9_CLOBA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIL07622.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_4_1_scaffold_130_7
unknown

Not on your lists

6628..6882
DNA (255bp) protein (85aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_130_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6949..7323
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002F13D09
Uncharacterized protein {ECO:0000313|EMBL:ACD24825.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
hypothetical protein
NECEvent2014_4_1_scaffold_130_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7603..8901
DNA (1299bp) protein (433aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGE9_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_4_1_scaffold_130_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9073..9396
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARR6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35454.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
NECEvent2014_4_1_scaffold_130_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9453..9761
DNA (309bp) protein (103aa)
celA5; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIB component n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6X1_CLOBU
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:ENZ35455.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_4_1_scaffold_130_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9847..10743
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6F4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35456.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative sugar kinase
NECEvent2014_4_1_scaffold_130_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10776..12206
DNA (1431bp) protein (477aa)
bglA2; 6-phospho-beta-glucosidase BglA (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=2 Tax=Clostridium butyricum RepID=B1QVX1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89619.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_1_scaffold_130_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12658..13998
DNA (1341bp) protein (447aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium butyricum RepID=B1QVX2_CLOBU rbh
Transcriptional regulator, GntR family/aminotransferase, classes I and II {ECO:0000313|EMBL:EEP52812.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
GntR family transcriptional regulator
NECEvent2014_4_1_scaffold_130_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14152..15465)
DNA (1314bp) protein (438aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJZ85154.1}; EC=3.2.1.86 {ECO:0000313|EMBL:KJZ85154.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDG0_CLOBU rbh
NECEvent2014_4_1_scaffold_130_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15996..17699
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHF4_CLOBU rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EEP52706.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E
methyl-accepting chemotaxis protein
NECEvent2014_4_1_scaffold_130_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17821..19878
DNA (2058bp) protein (686aa)
Membrane associated methyl-accepting chemotaxis protein n=2 Tax=Clostridium butyricum RepID=B1QVX4_CLOBU rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP52887.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis protein
NECEvent2014_4_1_scaffold_130_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19942..20691)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATT8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35462.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RpiR family transcriptional regulator
NECEvent2014_4_1_scaffold_130_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20822..23503)
DNA (2682bp) protein (894aa)
Transcriptional regulatory protein LevR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNX4_CLOBU rbh
NtrC family Transcriptional regulator, ATPase domain {ECO:0000313|EMBL:KJZ85156.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
sigma-54 factor interaction domain-containing protein
NECEvent2014_4_1_scaffold_130_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24015..24335
DNA (321bp) protein (107aa)
Lichenan-specific phosphotransferase enzyme iia component n=2 Tax=Clostridium butyricum RepID=M8JDG5_CLOBU
PTS sorbose transporter subunit IIC {ECO:0000313|EMBL:KHD15396.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
NECEvent2014_4_1_scaffold_130_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24426..24731
DNA (306bp) protein (102aa)
phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iib component n=3 Tax=Clostridium butyricum RepID=B1QVX8_CLOBU
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:KHD15397.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.
NECEvent2014_4_1_scaffold_130_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25004..26350
DNA (1347bp) protein (449aa)
UPI0003D5A61C related cluster n=1 Tax=unknown RepID=UPI0003D5A61C rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_4_1_scaffold_130_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26755..28083
DNA (1329bp) protein (443aa)
Bacterial solute-binding protein 1 family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMN3_CLOBU rbh
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:KJZ85097.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
carbohydrate ABC transporter substrate-binding protein, CUT1 family
NECEvent2014_4_1_scaffold_130_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28200..29102
DNA (903bp) protein (301aa)
UPI0003D6074C related cluster n=1 Tax=unknown RepID=UPI0003D6074C rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:ETI90786.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_
carbohydrate ABC transporter membrane protein 1, CUT1 family
NECEvent2014_4_1_scaffold_130_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29125..30045
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARS9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89621.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
NECEvent2014_4_1_scaffold_130_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30207..30722
DNA (516bp) protein (172aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QVY3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD15401.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_4_1_scaffold_130_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30863..31291
DNA (429bp) protein (143aa)
RNA polymerase sigma factor SigV n=2 Tax=Clostridium butyricum RepID=B1QVY4_CLOBU
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EEP52780.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
RNA polymerase subunit sigma-24
NECEvent2014_4_1_scaffold_130_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31284..32129
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVY5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP52873.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_1_scaffold_130_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32253..33017)
DNA (765bp) protein (255aa)
DeoR-family transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8KHG5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89606.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator
NECEvent2014_4_1_scaffold_130_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33168..33305
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVY7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52644.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
Displaying items 1-30 of 38 in total

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