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NECEvent2014_4_1_scaffold_205

Alias: 174_001_scaffold_205

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_205_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

368..1153
DNA (786bp) protein (262aa)
Electron transfer flavoprotein beta-subunit n=3 Tax=Clostridium butyricum RepID=B1QSI1_CLOBU rbh
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:KJZ83512.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
electron transfer flavoprotein, alpha/beta-subunit-like protein
NECEvent2014_4_1_scaffold_205_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1174..2112
DNA (939bp) protein (313aa)
Low-specificity L-threonine aldolase {ECO:0000313|EMBL:KJZ96056.1}; EC=4.1.2.48 {ECO:0000313|EMBL:KJZ96056.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Electron transfer flavoprotein, alpha subunit n=2 Tax=Clostridium butyricum RepID=M8KDF5_CLOBU rbh
electron transfer flavoprotein subunit alpha-like protein
NECEvent2014_4_1_scaffold_205_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2397..3938
DNA (1542bp) protein (514aa)
Lactate permease (LctP) family transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW79_CLOBU rbh
Lactate permease (LctP) family transporter {ECO:0000313|EMBL:ENZ36292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
lctP; L-lactate permease LctP
NECEvent2014_4_1_scaffold_205_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4092..5525
DNA (1434bp) protein (478aa)
FAD/FMN-containing dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QSI4_CLOBU rbh
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:ENZ36293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3
glcD2; glycolate oxidase subunit GlcD
NECEvent2014_4_1_scaffold_205_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5766..6908
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KJZ86981.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KJZ86981.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
bcd3; acyl-CoA dehydrogenase, short-chain specific (EC:1.3.8.1)
Acyl-coa dehydrogenase, short-chain specific n=2 Tax=Clostridium butyricum RepID=M8JIJ9_CLOBU rbh
NECEvent2014_4_1_scaffold_205_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7227..8273
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z959_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86984.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_4_1_scaffold_205_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8634..10085
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8W5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36296.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein involved in the export of O-antigen and teichoic acid
NECEvent2014_4_1_scaffold_205_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10272..10928)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW81_CLOBU rbh
Putative fibronectin-binding protein {ECO:0000313|EMBL:KJZ83553.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
fibronectin-binding protein
NECEvent2014_4_1_scaffold_205_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11042..11320)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R240_CLOBU
Response regulator receiver protein {ECO:0000313|EMBL:ETI90608.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
Mor transcription activator family
NECEvent2014_4_1_scaffold_205_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11750..12079
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R241_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83535.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_205_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12101..12802
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z964_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36300.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_205_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12875..13429
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8X0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83538.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_205_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13677..14909
DNA (1233bp) protein (411aa)
UPI0003D5B8DB related cluster n=1 Tax=unknown RepID=UPI0003D5B8DB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI90604.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_4_1_scaffold_205_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14947..16182
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIW5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36303.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_205_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16554..17789
DNA (1236bp) protein (412aa)
Cytosine permease n=2 Tax=Clostridium butyricum RepID=B1R247_CLOBU rbh
Cytosine permease {ECO:0000313|EMBL:EEP54038.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL52
codB; Cytosine permease
NECEvent2014_4_1_scaffold_205_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17878..19143
DNA (1266bp) protein (422aa)
Cytosine deaminase {ECO:0000313|EMBL:KJZ83497.1}; EC=3.5.4.1 {ECO:0000313|EMBL:KJZ83497.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
codA; Cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDE3_CLOBU rbh
NECEvent2014_4_1_scaffold_205_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19412..20017
DNA (606bp) protein (202aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1R249_CLOBU rbh
Putative lipoprotein {ECO:0000313|EMBL:EEP53711.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E B
putative lipoprotein
NECEvent2014_4_1_scaffold_205_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20291..21154
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8X4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36306.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NERD domain-containing protein
NECEvent2014_4_1_scaffold_205_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21202..21348
DNA (147bp) protein (49aa)
Nuclease-related domain family n=2 Tax=Clostridium butyricum RepID=B1R251_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83501.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_1_scaffold_205_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21589..22239
DNA (651bp) protein (217aa)
Methyltransferase domain family n=2 Tax=Clostridium butyricum RepID=B1R253_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92279.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
methyltransferase type 11
NECEvent2014_4_1_scaffold_205_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22242..24743
DNA (2502bp) protein (834aa)
Type III restriction protein, res subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDE0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92277.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
type III restriction protein, res subunit
Displaying 21 items

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