ggKbase home page

NECEvent2014_4_1_scaffold_233

Alias: 174_001_scaffold_233

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_233_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10..1035)
DNA (1026bp) protein (342aa)
pldB2; lysophospholipase L2 (EC:3.1.1.5)
Alpha/beta hydrolase family protein n=2 Tax=Clostridium butyricum RepID=M8J7T4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33646.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_233_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1168..2217)
DNA (1050bp) protein (350aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBP8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33647.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HD-GYP domain-containing protein
NECEvent2014_4_1_scaffold_233_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2275..3360)
DNA (1086bp) protein (362aa)
UPI0003D5EBEA related cluster n=1 Tax=unknown RepID=UPI0003D5EBEA rbh
HD-GYP hydrolase protein {ECO:0000313|EMBL:ETI90896.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
HD-GYP domain protein
NECEvent2014_4_1_scaffold_233_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3431..4288)
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ALL3_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:KJZ89004.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_1_scaffold_233_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4476..4634)
DNA (159bp) protein (53aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZN5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33650.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_233_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4714..5064)
DNA (351bp) protein (117aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8J7U0_CLOBU
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:ENZ33651.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
glutaredoxin family protein, arsenate reductase
NECEvent2014_4_1_scaffold_233_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5209..5922)
DNA (714bp) protein (238aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1492 species="Bacteria;
deoD; purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=4 Tax=Clostridium butyricum RepID=B1QZN7_CLOBU rbh
NECEvent2014_4_1_scaffold_233_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5942..6337)
DNA (396bp) protein (132aa)
cdd; cytidine deaminase Cdd (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Clostridium butyricum RepID=M8K3H2_CLOBU
Cytidine deaminase {ECO:0000313|EMBL:ENZ33653.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_1_scaffold_233_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6497..7450)
DNA (954bp) protein (318aa)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JGQ5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33654.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter permease
NECEvent2014_4_1_scaffold_233_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7452..8561)
DNA (1110bp) protein (370aa)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JIA1_CLOBU rbh
ABC transporter, permease protein {ECO:0000313|EMBL:KJZ89066.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
yufP; ABC transporter permease protein YufP
NECEvent2014_4_1_scaffold_233_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8554..10083)
DNA (1530bp) protein (510aa)
Galactose/methyl galactoside import ATP-binding protein MglA n=4 Tax=Clostridium butyricum RepID=B1QZP1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33656.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
yufO; ABC transporter ATP-binding protein YufO
NECEvent2014_4_1_scaffold_233_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10299..11411)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANI3_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:KHD15936.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_1_scaffold_233_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11566..12579)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AB96_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33658.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
regA2; HTH-type transcriptional regulator RegA
NECEvent2014_4_1_scaffold_233_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13316..14494)
DNA (1179bp) protein (393aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KJZ88956.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KJZ88956.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.-)
Aspartate aminotransferase n=3 Tax=Clostridium butyricum RepID=B1QZP4_CLOBU rbh
NECEvent2014_4_1_scaffold_233_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14491..14970)
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridium butyricum RepID=B1QZP5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89062.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AsnC family transcriptional regulator
NECEvent2014_4_1_scaffold_233_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15590..15742)
DNA (153bp) protein (51aa)
Conserved domain protein n=3 Tax=Clostridium butyricum RepID=B1QZP6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94854.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_1_scaffold_233_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15902..18160)
DNA (2259bp) protein (753aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z176_CLOBU rbh
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:ENZ33661.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
ATPase
NECEvent2014_4_1_scaffold_233_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18166..18465)
DNA (300bp) protein (100aa)
ATP-dependent Clp protease adapter protein ClpS n=3 Tax=Clostridium butyricum RepID=B1QZP8_CLOBU
Clp protease ClpS {ECO:0000313|EMBL:KHD15930.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
clpS; ATP-dependent Clp protease adapter protein ClpS
NECEvent2014_4_1_scaffold_233_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18688..18795)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q2E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI91083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_4_1_scaffold_233_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18828..20315)
DNA (1488bp) protein (496aa)
Transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABA1_CLOBU rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sodium/proline symporter
Displaying 20 items

View Taxonomy