ggKbase home page

NECEvent2014_4_1_scaffold_264

Alias: 174_001_scaffold_264

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_264_trna_1
unknown

Not on your lists

18..89
DNA (72bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_2
unknown

Not on your lists

123..193
DNA (71bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_3
unknown

Not on your lists

213..285
DNA (73bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_4
unknown

Not on your lists

333..404
DNA (72bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_5
unknown

Not on your lists

420..492
DNA (73bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_6
unknown

Not on your lists

499..580
DNA (82bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_7
unknown

Not on your lists

664..737
DNA (74bp)
transferRNA
NECEvent2014_4_1_scaffold_264_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(909..1778)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=4 Tax=Clostridium butyricum RepID=B1QXT7_CLOBU rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEP55259.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
AraC family transcriptional regulator
NECEvent2014_4_1_scaffold_264_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1975..2862
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT8_CLOBU rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EEP55326.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
yurN; hypothetical protein
NECEvent2014_4_1_scaffold_264_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2875..3762
DNA (888bp) protein (296aa)
Permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT9_CLOBU rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KJZ88020.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
ABC transporter
NECEvent2014_4_1_scaffold_264_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3773..5932
DNA (2160bp) protein (720aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSB9_CLOBU rbh
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:ENZ30315.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
hypothetical protein
NECEvent2014_4_1_scaffold_264_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6191..7537
DNA (1347bp) protein (449aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8JFI5_CLOBU rbh
Carbohydrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ30317.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
ABC transporter
NECEvent2014_4_1_scaffold_264_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7601..8557
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1G5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30318.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BadF/BadG/BcrA/BcrD family ATPase
NECEvent2014_4_1_scaffold_264_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8592..9731)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE8_CLOBU rbh
NECEvent2014_4_1_scaffold_264_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10014..10511
DNA (498bp) protein (166aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Clostridium butyricum RepID=M8J6M0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_1_scaffold_264_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10543..11313
DNA (771bp) protein (257aa)
PTS system, N-acetylgalactosamine-specific IIC component {ECO:0000313|EMBL:KJZ88016.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ88016.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridial
PTS system sorbose-specific IIC component n=2 Tax=Clostridium butyricum RepID=M8JGU3_CLOBU rbh
PTS system sorbose-specific transporter subunit IIC
NECEvent2014_4_1_scaffold_264_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11303..12148
DNA (846bp) protein (282aa)
N-acetylgalactosamine permease iid component n=2 Tax=Clostridium butyricum RepID=M8JFI0_CLOBU rbh
PTS system, mannose-specific IID component {ECO:0000313|EMBL:KJZ88014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_4_1_scaffold_264_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12284..13030
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium butyricum RepID=M8K263_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
NECEvent2014_4_1_scaffold_264_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13132..14292
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC25_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30324.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative phosphosugar isomerase
NECEvent2014_4_1_scaffold_264_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14311..14742
DNA (432bp) protein (144aa)
Pts system mannose-specific eiiab component n=3 Tax=Clostridium butyricum RepID=B1QXU9_CLOBU
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ30325.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system fructose IIA component
NECEvent2014_4_1_scaffold_264_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14788..15642
DNA (855bp) protein (285aa)
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=2 Tax=Clostridium butyricum RepID=M8JGU0_CLOBU rbh
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:ENZ30326.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_4_1_scaffold_264_trna_8
unknown

Not on your lists

16110..16183
DNA (74bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_9
unknown

Not on your lists

16207..16277
DNA (71bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_10
unknown

Not on your lists

16550..16620
DNA (71bp)
transferRNA
NECEvent2014_4_1_scaffold_264_trna_11
unknown

Not on your lists

16997..17070
DNA (74bp)
transferRNA
Displaying 25 items

View Taxonomy