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NECEvent2014_4_1_scaffold_308_10

Organism: NECEvent2014_4_1_Clostridium_butyricum_29_256

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(9668..10153)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Clostridium butyricum RepID=B1R2E2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 317
  • Evalue 5.80e-84
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 161.0
  • Bit_score: 316
  • Evalue 2.40e-83
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 156.0
  • Bit_score: 208
  • Evalue 1.40e-51

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
GTGCTTGCAATTTTAAAAAGAAAAAAAGTGGAAAAATATATAATAGAAAATAGAGAGTATTATTATAGATTAGCTTATTCTTATGTGAAAAATGAAGCTGATTCACTAGATGTTATACAAGAATCAATTATTAAAGCTCTAATTTCAATTGAAAGTTTGAAGGAAATAGAAAAAGTAAAATCATGGTTTTATAAGATAGTTATTAGAACAAGTATTGACTATATAAGAAAGAATAAAAAATATAATGATATGATAGATATTTCTGAAATTATAAATAATGGTAAGTCAGATCAATATAAGGACTTAGATTTATATAAAGCATTAGATGAATTAGATGAAACATATAAAACAATTATAATTTTAAGATACTTTGAAGATATGAAGATAAATGATATTGCCGATATATTAGATGAAAATCCAAATACAGTTAAGACAAGATTATATGCAGGGTTAAAAAAATTAAAAATAGATATAGGGGAGTGTTAG
PROTEIN sequence
Length: 162
VLAILKRKKVEKYIIENREYYYRLAYSYVKNEADSLDVIQESIIKALISIESLKEIEKVKSWFYKIVIRTSIDYIRKNKKYNDMIDISEIINNGKSDQYKDLDLYKALDELDETYKTIIILRYFEDMKINDIADILDENPNTVKTRLYAGLKKLKIDIGEC*