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NECEvent2014_4_1_scaffold_308

Alias: 174_001_scaffold_308

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_308_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96..1100)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV00_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31255.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_1_scaffold_308_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1109..2128)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Clostridium butyricum RepID=B1R2F0_CLOBU rbh
gcp; tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
NECEvent2014_4_1_scaffold_308_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2498..3133
DNA (636bp) protein (212aa)
Endodeoxyribonuclease, RusA family protein n=2 Tax=Clostridium butyricum RepID=B1R2E9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85479.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
holliday junction resolvase
NECEvent2014_4_1_scaffold_308_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3148..3711
DNA (564bp) protein (188aa)
Lipolytic protein, G-D-S-L family n=2 Tax=Clostridium butyricum RepID=M8J6R4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85480.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lipolytic protein, G-D-S-L family
NECEvent2014_4_1_scaffold_308_5

Not on your lists

comp(3751..4710)
DNA (960bp) protein (320aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAJ5_CLOBU rbh
Oxidoreductase, pyridine nucleotide-disulfide family {ECO:0000313|EMBL:ETJ16423.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain protein
NECEvent2014_4_1_scaffold_308_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4833..5624
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV05_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85474.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_1_scaffold_308_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5714..7057)
DNA (1344bp) protein (448aa)
Peptidase U62, modulator of DNA gyrase n=2 Tax=Clostridium butyricum RepID=M8JFN9_CLOBU rbh
TldE protein, part of TldE/TldD proteolytic complex {ECO:0000313|EMBL:KJZ89170.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
pmbA; protein PmbA
NECEvent2014_4_1_scaffold_308_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7060..8439)
DNA (1380bp) protein (460aa)
TldD protein n=4 Tax=Clostridium butyricum RepID=B1R2E4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
TldD protein
NECEvent2014_4_1_scaffold_308_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8830..9663)
DNA (834bp) protein (278aa)
YrhM n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6R9_CLOBU rbh
TldE protein, part of TldE/TldD proteolytic complex {ECO:0000313|EMBL:KJZ85511.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
rsiV; extracytoplasmic function (ECF) anti-sigmafactor rsiV
NECEvent2014_4_1_scaffold_308_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9668..10153)
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=3 Tax=Clostridium butyricum RepID=B1R2E2_CLOBU rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA polymerase sigma factor
NECEvent2014_4_1_scaffold_308_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10457..11404)
DNA (948bp) protein (316aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ89176.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ89176.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Polysaccharide deacetylase n=2 Tax=Clostridium butyricum RepID=M8K2B5_CLOBU rbh
polysaccharide deacetylase
NECEvent2014_4_1_scaffold_308_trna_1
unknown

Not on your lists

comp(11765..11836)
DNA (72bp)
transferRNA
Displaying 12 items

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