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NECEvent2014_4_1_scaffold_187

Alias: 174_001_scaffold_187

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_187_1
unknown

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_187_2
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(180..1751)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU64_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY79191.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
hypothetical protein
NECEvent2014_4_1_scaffold_187_3
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1759..2157)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU65_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGY79192.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
hypothetical protein
NECEvent2014_4_1_scaffold_187_4
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2564..2941)
DNA (378bp) protein (126aa)
HNH endonuclease domain protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU66_9ACTO
HNH endonuclease domain protein {ECO:0000313|EMBL:EGY79193.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium
phage associated protein
NECEvent2014_4_1_scaffold_187_5
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3099..3560)
DNA (462bp) protein (154aa)
Phage-associated protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU67_9ACTO rbh
Phage-associated protein {ECO:0000313|EMBL:EGY79194.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage-associated protein
NECEvent2014_4_1_scaffold_187_6
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3551..4927)
DNA (1377bp) protein (459aa)
SNF2 domain protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU68_9ACTO rbh
SNF2 domain protein {ECO:0000313|EMBL:EGY79195.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC
phage-associated protein
NECEvent2014_4_1_scaffold_187_7
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4908..5186)
DNA (279bp) protein (93aa)
VRR-NUC domain protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU69_9ACTO
VRR-NUC domain protein {ECO:0000313|EMBL:EGY79196.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum A
hypothetical protein
NECEvent2014_4_1_scaffold_187_8
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5320..7578)
DNA (2259bp) protein (753aa)
Prophage LambdaSa04 P4 family protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU70_9ACTO rbh
Prophage LambdaSa04 P4 family protein {ECO:0000313|EMBL:EGY79197.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibac
phage-associated protein
NECEvent2014_4_1_scaffold_187_9
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7575..8012)
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Propionibacterium RepID=G4CU71_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS26596.1}; TaxID=1203629 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
hypothetical protein
NECEvent2014_4_1_scaffold_187_10
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8009..8773)
DNA (765bp) protein (255aa)
Bro family antirepressor n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU72_9ACTO rbh
Bro family antirepressor {ECO:0000313|EMBL:EGY79199.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Bro family antirepressor
NECEvent2014_4_1_scaffold_187_11
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9165..10139
DNA (975bp) protein (325aa)
Phage AbiD protein n=2 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU73_9ACTO rbh
Phage AbiD protein {ECO:0000313|EMBL:EGY79200.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC
abortive infection bacteriophage resistance protein
NECEvent2014_4_1_scaffold_187_12
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10153..11271)
DNA (1119bp) protein (373aa)
Prophage LambdaSa04 DNA-directed DNA polymerase {ECO:0000313|EMBL:EGY79201.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGY79201.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionib
Prophage LambdaSa04 DNA-directed DNA polymerase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU74_9ACTO rbh
bacteriophage-type DNA polymerase
NECEvent2014_4_1_scaffold_187_13
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11223..12122)
DNA (900bp) protein (300aa)
Prophage LambdaSa04 DNA-directed DNA polymerase {ECO:0000313|EMBL:EGY79202.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGY79202.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionib
Prophage LambdaSa04 DNA-directed DNA polymerase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU75_9ACTO rbh
bacteriophage-type DNA polymerase
NECEvent2014_4_1_scaffold_187_14
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12195..12383)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU76_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGY79203.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
hypothetical protein; K03970 phage shock protein B
NECEvent2014_4_1_scaffold_187_15
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12397..12951)
DNA (555bp) protein (185aa)
Phage-associated protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU77_9ACTO rbh
Phage-associated protein {ECO:0000313|EMBL:EGY79204.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage-associated protein
NECEvent2014_4_1_scaffold_187_16
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12973..14112)
DNA (1140bp) protein (380aa)
Phage protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU78_9ACTO rbh
Phage protein {ECO:0000313|EMBL:EGY79205.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577
phage-associated protein
NECEvent2014_4_1_scaffold_187_17
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14105..14512)
DNA (408bp) protein (136aa)
Phage-associated protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU79_9ACTO
Phage-associated protein {ECO:0000313|EMBL:EGY79206.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage-associated protein
NECEvent2014_4_1_scaffold_187_18
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14509..14754)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU80_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGY79207.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage protein
NECEvent2014_4_1_scaffold_187_19
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14821..15492)
DNA (672bp) protein (224aa)
Sigma-70 region 4 superfamily protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU81_9ACTO rbh
Sigma-70 region 4 superfamily protein {ECO:0000313|EMBL:EGY79208.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibac
hypothetical protein
NECEvent2014_4_1_scaffold_187_20
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15989..17119
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU83_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY79210.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage protein
NECEvent2014_4_1_scaffold_187_21

Not on your lists

17116..17343
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU84_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ39021.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_187_22
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17333..19054
DNA (1722bp) protein (574aa)
ATPase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU85_9ACTO rbh
ATPase {ECO:0000313|EMBL:EGY79212.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
DNA double-strand break repair ATPase
NECEvent2014_4_1_scaffold_187_23
Propionibacterium sp. DORA_15, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19051..19287
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU86_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETI89732.1}; Flags: Fragment;; TaxID=1403938 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propio
hypothetical protein
NECEvent2014_4_1_scaffold_187_24
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19328..21286
DNA (1959bp) protein (653aa)
Type III restriction system methylase {ECO:0000313|EMBL:EGY79214.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EGY79214.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriace
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Type III restriction system methylase n=2 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU87_9ACTO rbh
NECEvent2014_4_1_scaffold_187_25
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21302..24268
DNA (2967bp) protein (989aa)
type III site-specific deoxyribonuclease (EC:3.1.21.5) rbh
Type III restriction system endonuclease n=3 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU88_9ACTO rbh
Type III restriction system endonuclease {ECO:0000313|EMBL:EGY79215.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propioni
NECEvent2014_4_1_scaffold_187_26
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24280..27132
DNA (2853bp) protein (951aa)
Helicase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU89_9ACTO rbh
Helicase {ECO:0000313|EMBL:EGY79216.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
SNF2-related protein rbh
NECEvent2014_4_1_scaffold_187_27
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27163..28176
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CU90_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY79217.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
phage protein
NECEvent2014_4_1_scaffold_187_28
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28375..28533)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Propionibacterium RepID=U7IR01_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS24678.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
helicase
Displaying 28 items

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